RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TICRRQ7Z2Z1 1910 aa24.28■■□□□ 1.48
ACTN1-220ENST00000556433 HMGA1P17096 107 aaKnown RBP24.28■■□□□ 1.48
ACTN1-220ENST00000556433 GPR15P49685 360 aa24.28■■□□□ 1.48
ACTN1-220ENST00000556433 ASIC1P78348 528 aa24.28■■□□□ 1.48
ACTN1-220ENST00000556433 SHC4Q6S5L8 630 aa24.28■■□□□ 1.48
ACTN1-220ENST00000556433 CBWD2Q8IUF1 395 aa24.28■■□□□ 1.48
ACTN1-220ENST00000556433 INTS13Q9NVM9 706 aa24.28■■□□□ 1.48
ACTN1-220ENST00000556433 GTSE1Q9NYZ3 720 aa24.28■■□□□ 1.48
ACTN1-220ENST00000556433 PATJQ8NI35 1801 aa24.28■■□□□ 1.48
ACTN1-220ENST00000556433 TNNC2P02585 160 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 F11P03951 625 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 HOXD13P35453 343 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 NLRP12P59046 1061 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 SURF1Q15526 300 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 DDR2Q16832 855 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 FOXD4L6Q3SYB3 417 aaPredicted RBP24.27■■□□□ 1.48
ACTN1-220ENST00000556433 INTS6LQ5JSJ4 861 aaKnown RBP24.27■■□□□ 1.48
ACTN1-220ENST00000556433 SDHAF4Q5VUM1 108 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 FOXD4L3Q6VB84 417 aaPredicted RBP24.27■■□□□ 1.48
ACTN1-220ENST00000556433 TMEM150AQ86TG1 271 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 OSTM1Q86WC4 334 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 TOP6BLQ8N6T0 577 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 CELF5Q8N6W0 485 aaKnown RBP24.27■■□□□ 1.48
ACTN1-220ENST00000556433 OR5B17Q8NGF7 314 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 ZNF507Q8TCN5 953 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 LEO1Q8WVC0 666 aaPredicted RBP24.27■■□□□ 1.48
ACTN1-220ENST00000556433 FAM126AQ9BYI3 521 aaPredicted RBP24.27■■□□□ 1.48
ACTN1-220ENST00000556433 THG1LQ9NWX6 298 aaKnown RBP24.27■■□□□ 1.48
ACTN1-220ENST00000556433 HSPBP1Q9NZL4 362 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 ZMYM5Q9UJ78 669 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 GTF3C4Q9UKN8 822 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 MAGED2Q9UNF1 606 aaPredicted RBP24.27■■□□□ 1.48
ACTN1-220ENST00000556433 OTOGLQ3ZCN5 2332 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 GPR179Q6PRD1 2367 aa24.27■■□□□ 1.48
ACTN1-220ENST00000556433 MYBPHLA2RUH7 354 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 SPECC1L-ADORA2AF8WAN1 911 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 LILRB5O75023 590 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 CSH1P0DML2 217 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 CSH2P0DML3 217 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 CYP2F1P24903 491 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 LHX1P48742 406 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 CCR3P51677 355 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 RPL10AP62906 217 aaKnown RBP24.26■■□□□ 1.47
ACTN1-220ENST00000556433 PLCB2Q00722 1185 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 MYO1EQ12965 1108 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 LRRC32Q14392 662 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 PPP2R5DQ14738 602 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 DUOXA2Q1HG44 320 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 RALGPS2Q86X27 583 aaPredicted RBP24.26■■□□□ 1.47
ACTN1-220ENST00000556433 ADGRF2Q8IZF7 708 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 CMTM8Q8IZV2 173 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 MAB21L3Q8N8X9 362 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 SPATA18Q8TC71 538 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 HPDLQ96IR7 371 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 C7orf25Q9BPX7 421 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 KIAA1586Q9HCI6 787 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 ABCB6Q9NP58 842 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 COL4A2P08572 1712 aa24.26■■□□□ 1.47
ACTN1-220ENST00000556433 EIF3DO15371 548 aaKnown RBP eCLIP24.25■■□□□ 1.47
ACTN1-220ENST00000556433 HSP90AA1P07900 732 aaKnown RBP24.25■■□□□ 1.47
ACTN1-220ENST00000556433 CTHP32929 405 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 AVPR1AP37288 418 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 CXCL12P48061 93 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 NRLP54845 237 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 TNK2Q07912 1038 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 SOWAHAQ2M3V2 549 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 FAM26FQ5R3K3 315 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 CNNM4Q6P4Q7 775 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 TXNDC11Q6PKC3 985 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 EPM2AIP1Q7L775 607 aaPredicted RBP24.25■■□□□ 1.47
ACTN1-220ENST00000556433 STKLD1Q8NE28 680 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 PKMYT1Q99640 499 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 GKN1Q9NS71 199 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 RBM12Q9NTZ6 932 aaKnown RBP24.25■■□□□ 1.47
ACTN1-220ENST00000556433 NCDNQ9UBB6 729 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 PTPRJQ12913 1337 aa24.25■■□□□ 1.47
ACTN1-220ENST00000556433 GABRDO14764 452 aa24.24■■□□□ 1.47
ACTN1-220ENST00000556433 POLR2DO15514 142 aaKnown RBP24.24■■□□□ 1.47
ACTN1-220ENST00000556433 HCRTO43612 131 aa24.24■■□□□ 1.47
ACTN1-220ENST00000556433 ZSCAN22P10073 491 aaPredicted RBP24.24■■□□□ 1.47
ACTN1-220ENST00000556433 PDIA4P13667 645 aaKnown RBP24.24■■□□□ 1.47
ACTN1-220ENST00000556433 DDX6P26196 483 aaKnown RBP eCLIP24.24■■□□□ 1.47
ACTN1-220ENST00000556433 PCSK1P29120 753 aa24.24■■□□□ 1.47
ACTN1-220ENST00000556433 GAS6Q14393 721 aa24.24■■□□□ 1.47
ACTN1-220ENST00000556433 TXNDC8Q6A555 127 aa24.24■■□□□ 1.47
ACTN1-220ENST00000556433 DPH6Q7L8W6 267 aa24.24■■□□□ 1.47
ACTN1-220ENST00000556433 SPATA2LQ8IUW3 424 aaPredicted RBP24.24■■□□□ 1.47
ACTN1-220ENST00000556433 HSCBQ8IWL3 235 aa24.24■■□□□ 1.47
ACTN1-220ENST00000556433 RDH13Q8NBN7 331 aa24.24■■□□□ 1.47
ACTN1-220ENST00000556433 MRPS31Q92665 395 aaKnown RBP24.24■■□□□ 1.47
ACTN1-220ENST00000556433 EPC1Q9H2F5 836 aa24.24■■□□□ 1.47
ACTN1-220ENST00000556433 TGFB1I1O43294 461 aa24.23■■□□□ 1.47
ACTN1-220ENST00000556433 TDGF1P13385 188 aa24.23■■□□□ 1.47
ACTN1-220ENST00000556433 FOXK2Q01167 660 aa24.23■■□□□ 1.47
ACTN1-220ENST00000556433 PON2Q15165 354 aa24.23■■□□□ 1.47
ACTN1-220ENST00000556433 ITPRIPL2Q3MIP1 535 aa24.23■■□□□ 1.47
ACTN1-220ENST00000556433 DGKKQ5KSL6 1271 aa24.23■■□□□ 1.47
ACTN1-220ENST00000556433 MON1AQ86VX9 555 aa24.23■■□□□ 1.47
ACTN1-220ENST00000556433 SPEM1Q8N4L4 309 aa24.23■■□□□ 1.47
ACTN1-220ENST00000556433 USP13Q92995 863 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms