RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 ATG2BQ96BY7 2078 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 ATP8B3O60423 1300 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 SF3B1O75533 1304 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHGA-205ENST00000556098 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.91□□□□□ -0.5
CHGA-205ENST00000556098 CCDC169A6NNP5 214 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 PRR5-ARHGAP8B1AHC4 643 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 NCAM2O15394 837 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 LDHAP00338 332 aaKnown RBP11.91□□□□□ -0.5
CHGA-205ENST00000556098 TARSP26639 723 aaKnown RBP11.91□□□□□ -0.5
CHGA-205ENST00000556098 GTF2H1P32780 548 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 KRT83P78385 493 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 ARHGAP8P85298 464 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 PFKPQ01813 784 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 DSC1Q08554 894 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 BFSP1Q12934 665 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 TFDP1Q14186 410 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 EXOC3L4Q17RC7 722 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 ZNF528Q3MIS6 628 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 ZC2HC1CQ53FD0 456 aaPredicted RBP11.91□□□□□ -0.5
CHGA-205ENST00000556098 PPM1JQ5JR12 505 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 NYAP1Q6ZVC0 841 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 MAEAQ7L5Y9 396 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 CACNA2D4Q7Z3S7 1137 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 RNF168Q8IYW5 571 aaPredicted RBP11.91□□□□□ -0.5
CHGA-205ENST00000556098 GPR161Q8N6U8 529 aaKnown RBP11.91□□□□□ -0.5
CHGA-205ENST00000556098 SLC35C1Q96A29 364 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 FAM81BQ96LP2 452 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 NFKBIZQ9BYH8 718 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 HEBP1Q9NRV9 189 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 CHST7Q9NS84 486 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 FNIP2Q9P278 1114 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 MYO1AQ9UBC5 1043 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 FBXW11Q9UKB1 542 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 BZW2Q9Y6E2 419 aaKnown RBP11.91□□□□□ -0.5
CHGA-205ENST00000556098 ZFP37Q9Y6Q3 630 aaPredicted RBP11.91□□□□□ -0.5
CHGA-205ENST00000556098 CEP250Q9BV73 2442 aa11.91□□□□□ -0.5
CHGA-205ENST00000556098 SSU72P8A0A1W2PR75 194 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 SLC16A4O15374 487 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 B4GALT5O43286 388 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 KIF4AO95239 1232 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 CCDC172P0C7W6 258 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 AXLP30530 894 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 GRIK3Q13003 919 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 GRM2Q14416 872 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.5
CHGA-205ENST00000556098 LILRA6Q6PI73 481 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 ZPBP2Q6X784 338 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 ZBTB8OSQ8IWT0 167 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 EHBP1Q8NDI1 1231 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 DEPTORQ8TB45 409 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 TMC2Q8TDI7 906 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 PPP1R13BQ96KQ4 1090 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 RTKNQ9BST9 563 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 TTPALQ9BTX7 342 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 RHOBTB2Q9BYZ6 727 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 MMRN2Q9H8L6 949 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 PARD6AQ9NPB6 346 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 HSPBP1Q9NZL4 362 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
CHGA-205ENST00000556098 USP20Q9Y2K6 914 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 PPP2R2CQ9Y2T4 447 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 GIT1Q9Y2X7 761 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 MRPS23Q9Y3D9 190 aaKnown RBP11.9□□□□□ -0.5
CHGA-205ENST00000556098 STYXL1Q9Y6J8 313 aa11.9□□□□□ -0.5
CHGA-205ENST00000556098 EML5Q05BV3 1969 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 HNRNPDLO14979 420 aaKnown RBP11.89□□□□□ -0.51
CHGA-205ENST00000556098 CLIC2O15247 247 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 ADAM12O43184 909 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 ARF4P18085 180 aaPredicted RBP11.89□□□□□ -0.51
CHGA-205ENST00000556098 FMO5P49326 533 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 ARPP19P56211 112 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 POU5F1Q01860 360 aaKnown RBP11.89□□□□□ -0.51
CHGA-205ENST00000556098 KCNA1Q09470 495 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 MTAPQ13126 283 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 DCAF17Q5H9S7 520 aaPredicted RBP11.89□□□□□ -0.51
CHGA-205ENST00000556098 TCERG1LQ5VWI1 586 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 CDCA2Q69YH5 1023 aaPredicted RBP11.89□□□□□ -0.51
CHGA-205ENST00000556098 ZNF852Q6ZMS4 543 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 NPAS3Q8IXF0 933 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 KIF18AQ8NI77 898 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 ASAP3Q8TDY4 903 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 CPLX3Q8WVH0 158 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 CLSTN3Q9BQT9 956 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 PLA2G2FQ9BZM2 168 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 TSGA10Q9BZW7 698 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 EPC1Q9H2F5 836 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 GPRC5CQ9NQ84 441 aa11.89□□□□□ -0.51
CHGA-205ENST00000556098 KMT2BQ9UMN6 2715 aaPredicted RBP11.89□□□□□ -0.51
CHGA-205ENST00000556098 NUP210Q8TEM1 1887 aaPredicted RBP11.89□□□□□ -0.51
CHGA-205ENST00000556098 SPAG17Q6Q759 2223 aa11.88□□□□□ -0.51
CHGA-205ENST00000556098 LRRIQ4A6NIV6 560 aa11.88□□□□□ -0.51
CHGA-205ENST00000556098 EIF3CLB5ME19 914 aaKnown RBP11.88□□□□□ -0.51
CHGA-205ENST00000556098 GFPT2O94808 682 aa11.88□□□□□ -0.51
CHGA-205ENST00000556098 NDUFA10O95299 355 aa11.88□□□□□ -0.51
CHGA-205ENST00000556098 HNRNPA1P09651 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHGA-205ENST00000556098 TNNT1P13805 278 aa11.88□□□□□ -0.51
CHGA-205ENST00000556098 GLRA2P23416 452 aa11.88□□□□□ -0.51
CHGA-205ENST00000556098 OR1D2P34982 312 aa11.88□□□□□ -0.51
CHGA-205ENST00000556098 MAGEA9P43362 315 aa11.88□□□□□ -0.51
CHGA-205ENST00000556098 LIG4P49917 911 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms