RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 RNASET2O00584 256 aaKnown RBP6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 TOR1BO14657 336 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 PLA2G6O60733 806 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 CFIP05156 583 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 HLA-DOAP06340 250 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 IDEP14735 1019 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 ITGALP20701 1170 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 LRPAP1P30533 357 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 ICA1Q05084 483 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 SPDYE7PQ495Y7 208 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 PRR16Q569H4 304 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 ANO1Q5XXA6 986 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 ZNF585AQ6P3V2 769 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 TMPRSS6Q8IU80 811 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 VGLL2Q8N8G2 317 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 NSUN7Q8NE18 718 aaKnown RBP6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 HERPUD2Q9BSE4 406 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 TTLL2Q9BWV7 592 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 TM7SF3Q9NS93 570 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 RAPGEFL1Q9UHV5 662 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 SPATA31A3Q5VYP0 1347 aa6.48□□□□□ -1.37
CKS1BP1-201ENST00000555221 PRAMEF33A0A0G2JMD5 474 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 A0A1W2PS29 197 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 AHRRA9YTQ3 701 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 DCLK1O15075 740 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 FFAR2O15552 330 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 PRAMEF10O60809 474 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 SUN1O94901 812 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 A1BGP04217 495 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 BTF3P20290 206 aaKnown RBP6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 CHRM3P20309 590 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 PXNP49023 591 aaPredicted RBP6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 CPT1AP50416 773 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 TOB1P50616 345 aaPredicted RBP6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 KRT17Q04695 432 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 PLP2Q04941 152 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 TOB2Q14106 344 aaPredicted RBP6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 BOP1Q14137 746 aaKnown RBP6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 TRIM14Q14142 442 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 ARHGEF7Q14155 803 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 PREPLQ4J6C6 727 aaPredicted RBP6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 FBXO38Q6PIJ6 1188 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 USP17L6PQ6QN14 398 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 ZDHHC24Q6UX98 284 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 TTLL10Q6ZVT0 673 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 KRT28Q7Z3Y7 464 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 TMEM132CQ8N3T6 1108 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 ZNF527Q8NB42 609 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 CYP2W1Q8TAV3 490 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 CXorf38Q8TB03 319 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 ZNF483Q8TF39 744 aaPredicted RBP6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 LRRC46Q96FV0 321 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 STK33Q9BYT3 514 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 GOLGA2P5Q9HBQ8 144 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 HEYLQ9NQ87 328 aaPredicted RBP6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 GJB4Q9NTQ9 266 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 TBC1D23Q9NUY8 699 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 ST6GALNAC2Q9UJ37 374 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 MAN2B2Q9Y2E5 1009 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 NOX1Q9Y5S8 564 aa6.47□□□□□ -1.37
CKS1BP1-201ENST00000555221 hCG_1642624A0A1W2PR95 340 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 CCDC78A2IDD5 438 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 MYADML2A6NDP7 307 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 RAB27BO00194 218 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 MUSKO15146 869 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 TYRP1P17643 537 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 TPH1P17752 444 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 LILRA4P59901 499 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 RPS7P62081 194 aaKnown RBP6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 CXADRP78310 365 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 HLXQ14774 488 aaPredicted RBP6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 INO80DQ53TQ3 878 aaPredicted RBP6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 RRAGBQ5VZM2 374 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 LRRC55Q6ZSA7 311 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 TMPRSS9Q7Z410 1059 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 BOD1Q96IK1 185 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 LRIG1Q96JA1 1093 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 CDK5RAP1Q96SZ6 601 aaKnown RBP6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 KLC2Q9H0B6 622 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 FAM83DQ9H4H8 585 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 VSX1Q9NZR4 365 aaPredicted RBP6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 TESMINQ9Y4I5 508 aa6.46□□□□□ -1.38
CKS1BP1-201ENST00000555221 GOLGA6L3A6NEY3 463 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 AQP7P3A6NL99 342 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 CREB3O43889 395 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 SKAP2O75563 359 aaPredicted RBP6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 ELANEP08246 267 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 ALDH9A1P49189 494 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 NDUFV1P49821 464 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 COPAP53621 1224 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 MC2RQ01718 297 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 FPGSQ05932 587 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 DYRK1AQ13627 763 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 BLMHQ13867 455 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 PUM3Q15397 648 aaKnown RBP6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 NPY5RQ15761 445 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 B3GNTL1Q67FW5 361 aaPredicted RBP6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 SFRP4Q6FHJ7 346 aaPredicted RBP6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 TMEM108Q6UXF1 575 aa6.45□□□□□ -1.38
CKS1BP1-201ENST00000555221 MICALCLQ6ZW33 695 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms