RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 HCRTO43612 131 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 CAND2O75155 1236 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 TRPA1O75762 1119 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 ZMYND10O75800 440 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 CABYRO75952 493 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 CD4P01730 458 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 P4HA1P13674 534 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 AFF1P51825 1210 aaKnown RBP9.43□□□□□ -0.9
TDP1-210ENST00000554976 MYO1EQ12965 1108 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 PDCLQ13371 301 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 TRADDQ15628 312 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 CLUL1Q15846 466 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 ZNF618Q5T7W0 954 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 C8orf74Q6P047 294 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 PHLDB2Q86SQ0 1253 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 UNC93AQ86WB7 457 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 TTC30AQ86WT1 665 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 GSPT2Q8IYD1 628 aaKnown RBP9.43□□□□□ -0.9
TDP1-210ENST00000554976 CRYBG2Q8N1P7 616 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 UBL4BQ8N7F7 174 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 PCSK9Q8NBP7 692 aaKnown RBP9.43□□□□□ -0.9
TDP1-210ENST00000554976 SPC25Q9HBM1 224 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 GOLGA2P5Q9HBQ8 144 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 ARFGAP3Q9NP61 516 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 KLK14Q9P0G3 267 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 LCMT1Q9UIC8 334 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 KIAA1257Q9ULG3 409 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 VWA8A3KMH1 1905 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 MOXD2PA6NHM9 499 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 SPDYE4A6NLX3 237 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 SIGLEC16A6NMB1 481 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 GABRDO14764 452 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 ZNF623O75123 536 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 FAM163BP0C2L3 166 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 WARSP23381 471 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 MCM3P25205 808 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 PTPN7P35236 360 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 RNASE9P60153 205 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 TNNC1P63316 161 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 SLC25A11Q02978 314 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 TAP1Q03518 808 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 ITGA7Q13683 1181 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 MBTPS1Q14703 1052 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 CYP4V2Q6ZWL3 525 aaPredicted RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 SLC13A5Q86YT5 568 aaPredicted RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 FNIP1Q8TF40 1166 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 KHSRPQ92945 711 aaKnown RBP eCLIP9.42□□□□□ -0.95e-6■■□□□ 14.1
TDP1-210ENST00000554976 SLCO2A1Q92959 643 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 SLC4A5Q9BY07 1137 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 DPEP3Q9H4B8 488 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 TRMT13Q9NUP7 481 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 FNDC1Q4ZHG4 1894 aaPredicted RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 SCN5AQ14524 2016 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 ZNF638Q14966 1978 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 TLR3O15455 904 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 SART1O43290 800 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 RPS6KA5O75582 802 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 CLSTN1O94985 981 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 TAZQ16635 292 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 PPP1R26Q5T8A7 1209 aaPredicted RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 CYP4A22Q5TCH4 519 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 OSTM1Q86WC4 334 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 JOSD2Q8TAC2 188 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 SLC35F5Q8WV83 523 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 NT5C1AQ9BXI3 368 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 DDX47Q9H0S4 455 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 PCYOX1Q9UHG3 505 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 IP6K2Q9UHH9 426 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 PHF24Q9UPV7 400 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 NEU2Q9Y3R4 380 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 KRIT1O00522 736 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 PHF2O75151 1096 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 CAPN15O75808 1086 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 HEXIM1O94992 359 aaKnown RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 INHAP05111 366 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 PNPLA4P41247 253 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 RWDD2BP57060 319 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 ZNF268Q14587 947 aaPredicted RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 SGO2Q562F6 1265 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 LRRC38Q5VT99 294 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 KIAA0319Q5VV43 1072 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 C12orf29Q8N999 325 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 ZNF296Q8WUU4 475 aaPredicted RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 MCEEQ96PE7 176 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 C11orf84Q9BUA3 381 aaPredicted RBP9.42□□□□□ -0.9
TDP1-210ENST00000554976 NEUROG2Q9H2A3 272 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 VIPAS39Q9H9C1 493 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 TSPAN16Q9UKR8 245 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 STRIP2Q9ULQ0 834 aa9.42□□□□□ -0.9
TDP1-210ENST00000554976 A0A1W2PQ45 241 aaPredicted RBP9.41□□□□□ -0.9
TDP1-210ENST00000554976 A0A1W2PQY0 241 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 KPNA7A9QM74 516 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 TP73O15350 636 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 HOXD10P28358 340 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 CDK7P50613 346 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 LILRA4P59901 499 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 NNTQ13423 1086 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 CASP8Q14790 479 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms