RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	OSBPL6	Q9BZF3	934 aa		11.13	□□□□□ -0.63
SRSF5-208	ENST00000554929	VIPAS39	Q9H9C1	493 aa		11.13	□□□□□ -0.63
SRSF5-208	ENST00000554929	PARVG	Q9HBI0	331 aa		11.13	□□□□□ -0.63
SRSF5-208	ENST00000554929	JADE2	Q9NQC1	790 aa		11.13	□□□□□ -0.63
SRSF5-208	ENST00000554929	IRAK3	Q9Y616	596 aa		11.13	□□□□□ -0.63
SRSF5-208	ENST00000554929	FRMPD4	Q14CM0	1322 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	DOCK8	Q8NF50	2099 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	TM4SF5	O14894	197 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	EPHB6	O15197	1021 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	NR3C1	P04150	777 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	RHOXF2B	P0C7M4	288 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	CCDC172	P0C7W6	258 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	LAMP2	P13473	410 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	GUCY2C	P25092	1073 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	PSMC2	P35998	433 aa	Known RBP	11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	CLCN4	P51793	760 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	ZNF131	P52739	623 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	NRL	P54845	237 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	GUCA2A	Q02747	115 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	PRKCQ	Q04759	706 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	KLHL30	Q0D2K2	578 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	SIM2	Q14190	667 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	SLC18A3	Q16572	532 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	EXOC3L4	Q17RC7	722 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	C1orf186	Q6ZWK4	172 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	GET4	Q7L5D6	327 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	HS2ST1	Q7LGA3	356 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	TPH2	Q8IWU9	490 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	NME8	Q8N427	588 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	TMEM40	Q8WWA1	233 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	SEPT1	Q8WYJ6	367 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	INPP4A	Q96PE3	977 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	KLHL5	Q96PQ7	755 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	USB1	Q9BQ65	265 aa	Known RBP	11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	RHOXF2	Q9BQY4	288 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	MXRA8	Q9BRK3	442 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	ZNF577	Q9BSK1	485 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	DDX23	Q9BUQ8	820 aa	Known RBP	11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	TIPIN	Q9BVW5	301 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	EMILIN2	Q9BXX0	1053 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	GAN	Q9H2C0	597 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	SMARCAD1	Q9H4L7	1026 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	LTB4R2	Q9NPC1	389 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	NLRC4	Q9NPP4	1024 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	PRMT8	Q9NR22	394 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	L1RE1	Q9UN81	338 aa		11.12	□□□□□ -0.63
SRSF5-208	ENST00000554929	GSTTP1	A0A1W2PQM5	241 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	ANHX	E9PGG2	379 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	EML1	O00423	815 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	ENC1	O14682	589 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	INPPL1	O15357	1258 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	NCAM2	O15394	837 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	FOXD2	O60548	495 aa	Predicted RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	STAM2	O75886	525 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	PRPF6	O94906	941 aa	Known RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	PLEK	P08567	350 aa	Predicted RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	PRKCI	P41743	596 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	POLG	P54098	1239 aa	Predicted RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	SNRPF	P62306	86 aa	Known RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	CYP4A11	Q02928	519 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	RAD51AP2	Q09MP3	1159 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	HTR4	Q13639	388 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	RAPGEF1	Q13905	1077 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	PLCB4	Q15147	1175 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	PPP2R5A	Q15172	486 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	NAB2	Q15742	525 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	GLE1	Q53GS7	698 aa	Known RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	CCDC181	Q5TID7	509 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	PSAPL1	Q6NUJ1	521 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	B3GNT9	Q6UX72	402 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	DDX53	Q86TM3	631 aa	Known RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	TMEM173	Q86WV6	379 aa	Predicted RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	MYCT1	Q8N699	235 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	C12orf50	Q8NA57	414 aa	Predicted RBP	11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	TMEM174	Q8WUU8	243 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	DYDC2	Q96IM9	177 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	SPAG5	Q96R06	1193 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	PPP1R16B	Q96T49	567 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	PNKP	Q96T60	521 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	MMS19	Q96T76	1030 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	SENP7	Q9BQF6	1050 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	RUSC1	Q9BVN2	902 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	FGFBP2	Q9BYJ0	223 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	MAN1C1	Q9NR34	630 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	RGL1	Q9NZL6	768 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	INTU	Q9ULD6	942 aa		11.11	□□□□□ -0.63
SRSF5-208	ENST00000554929	SMIM35	A0A1B0GVV1	85 aa		11.1	□□□□□ -0.63
SRSF5-208	ENST00000554929	GRID2IP	A4D2P6	1211 aa		11.1	□□□□□ -0.63
SRSF5-208	ENST00000554929	ARHGEF35	A5YM69	484 aa		11.1	□□□□□ -0.63
SRSF5-208	ENST00000554929	IPO5	O00410	1097 aa	Known RBP	11.1	□□□□□ -0.63
SRSF5-208	ENST00000554929	CES2	O00748	559 aa		11.1	□□□□□ -0.63
SRSF5-208	ENST00000554929	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.1	□□□□□ -0.63	2e-23	■■■■□ 19.3
SRSF5-208	ENST00000554929	MOCS3	O95396	460 aa		11.1	□□□□□ -0.63
SRSF5-208	ENST00000554929	P4HB	P07237	508 aa	Known RBP	11.1	□□□□□ -0.63
SRSF5-208	ENST00000554929	CNP	P09543	421 aa	Known RBP	11.1	□□□□□ -0.63
SRSF5-208	ENST00000554929	FER	P16591	822 aa		11.1	□□□□□ -0.63
SRSF5-208	ENST00000554929	TARS	P26639	723 aa	Known RBP	11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms