RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567	ADSS	P30520	456 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	TFAM	Q00059	246 aa	Known RBP	28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	TSPY1	Q01534	308 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	TMEM196	Q5HYL7	178 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	FSTL4	Q6MZW2	842 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	TTC16	Q8NEE8	873 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	ZNF560	Q96MR9	790 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	FAM213A	Q9BRX8	229 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	ARRDC1-AS1	Q9H2J1	176 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	TBC1D7	Q9P0N9	293 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	ZMYM5	Q9UJ78	669 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	SLC8A2	Q9UPR5	921 aa		28.58	■■■□□ 2.17
KTN1-215	ENST00000554567	SDK1	Q7Z5N4	2213 aa		28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	POSTN	Q15063	836 aa		28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	AASDH	Q4L235	1098 aa	Predicted RBP	28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	CC2D1A	Q6P1N0	951 aa	Predicted RBP	28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	USP49	Q70CQ1	688 aa		28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	MRPS31	Q92665	395 aa	Known RBP	28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	MRPL44	Q9H9J2	332 aa	Known RBP	28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	AGAP1	Q9UPQ3	857 aa		28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	EPG5	Q9HCE0	2579 aa		28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	ZNF638	Q14966	1978 aa	Known RBP	28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	ATG2B	Q96BY7	2078 aa		28.57	■■■□□ 2.16
KTN1-215	ENST00000554567	RPP40	O75818	363 aa	Known RBP	28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	ARSA	P15289	507 aa		28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	DDX6	P26196	483 aa	Known RBP eCLIP	28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	POLR2B	P30876	1174 aa	Known RBP	28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	WNT7B	P56706	349 aa		28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	POU5F1	Q01860	360 aa	Known RBP	28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	KCNA1	Q09470	495 aa		28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	SF3A2	Q15428	464 aa	Known RBP	28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	BRAP	Q7Z569	592 aa		28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	GAB3	Q8WWW8	586 aa		28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	SAAL1	Q96ER3	474 aa		28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	POLR3B	Q9NW08	1133 aa	Predicted RBP	28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	28.56	■■■□□ 2.16
KTN1-215	ENST00000554567	TRDMT1	O14717	391 aa	Known RBP	28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	FOXD2	O60548	495 aa	Predicted RBP	28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	ATG13	O75143	517 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	EGF	P01133	1207 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	ITGB3	P05106	788 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	CSH1	P0DML2	217 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	CSH2	P0DML3	217 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	CCDC192	P0DO97	292 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	ACAT1	P24752	427 aa	Known RBP	28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	PNPLA4	P41247	253 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	DDR2	Q16832	855 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	PDCL2	Q8N4E4	241 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	ZSWIM2	Q8NEG5	633 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	RIN3	Q8TB24	985 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	HVCN1	Q96D96	273 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	CHFR	Q96EP1	664 aa		28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	DDX43	Q9NXZ2	648 aa	Known RBP	28.55	■■■□□ 2.16
KTN1-215	ENST00000554567	CYP2F1	P24903	491 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	NFE2	Q16621	373 aa	Predicted RBP	28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	IL31	Q6EBC2	164 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	CACNA2D4	Q7Z3S7	1137 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	KBTBD6	Q86V97	674 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	MON1A	Q86VX9	555 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	NT5DC4	Q86YG4	428 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	C12orf50	Q8NA57	414 aa	Predicted RBP	28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	NOC3L	Q8WTT2	800 aa	Known RBP	28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	KIF9	Q9HAQ2	790 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	FBRSL1	Q9HCM7	1045 aa	Known RBP	28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	TRPC7	Q9HCX4	862 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	CCDC39	Q9UFE4	941 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	L1RE1	Q9UN81	338 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	EXOC7	Q9UPT5	735 aa		28.54	■■■□□ 2.16
KTN1-215	ENST00000554567	DENND4C	Q5VZ89	1909 aa		28.53	■■■□□ 2.16
KTN1-215	ENST00000554567	HUS1	O60921	280 aa		28.53	■■■□□ 2.16
KTN1-215	ENST00000554567	RNF40	O75150	1001 aa		28.53	■■■□□ 2.16
KTN1-215	ENST00000554567	GALK1	P51570	392 aa		28.53	■■■□□ 2.16
KTN1-215	ENST00000554567	AMPD2	Q01433	879 aa		28.53	■■■□□ 2.16
KTN1-215	ENST00000554567	SCARA3	Q6AZY7	606 aa		28.53	■■■□□ 2.16
KTN1-215	ENST00000554567	FAM84A	Q96KN4	292 aa		28.53	■■■□□ 2.16
KTN1-215	ENST00000554567	ACCS	Q96QU6	501 aa		28.53	■■■□□ 2.16
KTN1-215	ENST00000554567	CLIC4	Q9Y696	253 aa		28.53	■■■□□ 2.16
KTN1-215	ENST00000554567	PPP1R37	O75864	691 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	GCNT3	O95395	438 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	RPL10A	P62906	217 aa	Known RBP	28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	RRAGB	Q5VZM2	374 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	NAIF1	Q69YI7	327 aa	Predicted RBP	28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	CSGALNACT2	Q8N6G5	542 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	C1orf127	Q8N9H9	656 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	CACTIN	Q8WUQ7	758 aa	Known RBP	28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	CHAMP1	Q96JM3	812 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	CYP2S1	Q96SQ9	504 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	ACBD6	Q9BR61	282 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	STRA6	Q9BX79	667 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	STK17A	Q9UEE5	414 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	GTF3C4	Q9UKN8	822 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	ACACB	O00763	2458 aa		28.52	■■■□□ 2.16
KTN1-215	ENST00000554567	VPS37C	A5D8V6	355 aa	Predicted RBP	28.51	■■■□□ 2.15
KTN1-215	ENST00000554567	GOLGA8IP	A6NC78	632 aa		28.51	■■■□□ 2.15
KTN1-215	ENST00000554567	MYMK	A6NI61	221 aa		28.51	■■■□□ 2.15
KTN1-215	ENST00000554567	GOLGA8J	A6NMD2	632 aa		28.51	■■■□□ 2.15
KTN1-215	ENST00000554567	KRT19	P08727	400 aa		28.51	■■■□□ 2.15
KTN1-215	ENST00000554567	MYL7	Q01449	175 aa		28.51	■■■□□ 2.15
KTN1-215	ENST00000554567	L1TD1	Q5T7N2	865 aa	Known RBP	28.51	■■■□□ 2.15
KTN1-215	ENST00000554567	SYCP3	Q8IZU3	236 aa		28.51	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms