RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 BRD9Q9H8M2 597 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 ABCB6Q9NP58 842 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 TRPV5Q9NQA5 729 aa9.36□□□□□ -0.91
ACTN1-213ENST00000554508 ABI2Q9NYB9 513 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-213ENST00000554508 PTPRJQ12913 1337 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 H0Y858 1186 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 NRG2O14511 850 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-213ENST00000554508 SOAT2O75908 522 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 RHOBTB3O94955 611 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 ZNF202O95125 648 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 CST3P01034 146 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-213ENST00000554508 CSH1P0DML2 217 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 CSH2P0DML3 217 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 ATF6P18850 670 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 WARSP23381 471 aaKnown RBP9.35□□□□□ -0.91
ACTN1-213ENST00000554508 GABRR2P28476 465 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 ATICP31939 592 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 MAGEA9P43362 315 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 MRE11P49959 708 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 RPL10AP62906 217 aaKnown RBP9.35□□□□□ -0.91
ACTN1-213ENST00000554508 TRPC3Q13507 836 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 MAPRE1Q15691 268 aaKnown RBP9.35□□□□□ -0.91
ACTN1-213ENST00000554508 SCARA3Q6AZY7 606 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 FAM171BQ6P995 826 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 VITQ6UXI7 678 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 KRBA2Q6ZNG9 492 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 C4orf50Q6ZRC1 276 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 GAREM2Q75VX8 874 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 OSTM1Q86WC4 334 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 FANCMQ8IYD8 2048 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 PJA1Q8NG27 643 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 CCDC127Q96BQ5 260 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 FUBP3Q96I24 572 aaKnown RBP eCLIP9.35□□□□□ -0.91
ACTN1-213ENST00000554508 FAM84AQ96KN4 292 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 GCNAQ96QF7 691 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 PKMYT1Q99640 499 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 LPIN3Q9BQK8 851 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 PI4K2AQ9BTU6 479 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 KCTD10Q9H3F6 313 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 ZNF334Q9HCZ1 680 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-213ENST00000554508 TMLHEQ9NVH6 421 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 DMAC2Q9NW81 257 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 OBP2AQ9NY56 170 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 CDH9Q9ULB4 789 aa9.35□□□□□ -0.91
ACTN1-213ENST00000554508 MRPS17Q9Y2R5 130 aaKnown RBP9.35□□□□□ -0.91
ACTN1-213ENST00000554508 KIF26AQ9ULI4 1882 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 GOLGA6L4A6NEF3 574 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 HEPACAM2A8MVW5 462 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 MAN2B1O00754 1011 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 DPYSL4O14531 572 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 ZNF263O14978 683 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 MAPK13O15264 365 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 CHADO15335 359 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 NCAM2O15394 837 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 CALUO43852 315 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 TACC1O75410 805 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 GLULP15104 373 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 HMGA1P17096 107 aaKnown RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 ACAT1P24752 427 aaKnown RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 DDX6P26196 483 aaKnown RBP eCLIP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 GDI1P31150 447 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 VIPR2P41587 438 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 MAGEA11P43364 429 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 MLLT6P55198 1093 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 TNNC1P63316 161 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 CLDN10P78369 228 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 DPYDQ12882 1025 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 GRM2Q14416 872 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 KCNB1Q14721 858 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 ANGPT1Q15389 498 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 NFIL3Q16649 462 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 CFAP221Q4G0U5 840 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 GPR158Q5T848 1215 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 ZNF852Q6ZMS4 543 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 SPATA2LQ8IUW3 424 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 ARID3BQ8IVW6 561 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 YAF2Q8IY57 180 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 PARD3BQ8TEW8 1205 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 GIPC2Q8TF65 315 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 KBTBD7Q8WVZ9 684 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 ZNF516Q92618 1163 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 CEP295NLQ96MC4 621 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 MMS19Q96T76 1030 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 SYT15Q9BQS2 421 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 BCO2Q9BYV7 579 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 TASP1Q9H6P5 420 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 VRTNQ9H8Y1 702 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 IL21Q9HBE4 155 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 DLGAP2Q9P1A6 1054 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 MAGEC2Q9UBF1 373 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 UXTQ9UBK9 157 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-213ENST00000554508 GTF3C4Q9UKN8 822 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 TRAF3IP3Q9Y228 551 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 FRMD4BQ9Y2L6 1034 aa9.34□□□□□ -0.91
ACTN1-213ENST00000554508 COL4A2P08572 1712 aa9.34□□□□□ -0.92
ACTN1-213ENST00000554508 PATJQ8NI35 1801 aa9.33□□□□□ -0.92
ACTN1-213ENST00000554508 MYBPHLA2RUH7 354 aa9.33□□□□□ -0.92
ACTN1-213ENST00000554508 FAM170BA6NMN3 283 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms