RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 PBX3P40426 434 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 ARHGAP25P42331 645 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 GALCP54803 685 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 NOMO3P69849 1222 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 HTRA4P83105 476 aaPredicted RBP12.48□□□□□ -0.41
NEK9-202ENST00000553823 YWHAHQ04917 246 aaPredicted RBP12.48□□□□□ -0.41
NEK9-202ENST00000553823 NAA35Q5VZE5 725 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 ARHGAP17Q68EM7 881 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 OVOS1Q6IE37 1185 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 ACAD10Q6JQN1 1059 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 PPP1R2P3Q6NXS1 205 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 FUT10Q6P4F1 479 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 LCLAT1Q6UWP7 414 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 PASD1Q8IV76 773 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 TNS4Q8IZW8 715 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 THEM5Q8N1Q8 247 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 B3GALNT2Q8NCR0 500 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 TMEM35BQ8NCS4 154 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 PHOSPHO2Q8TCD6 241 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 ATRIPQ8WXE1 791 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 ZNF558Q96NG5 402 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 SLC9A7Q96T83 725 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 SYT15Q9BQS2 421 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 ZBED2Q9BTP6 218 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 PACSIN1Q9BY11 444 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 ZNF518BQ9C0D4 1074 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 LACRTQ9GZZ8 138 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 LHX5Q9H2C1 402 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 LZTFL1Q9NQ48 299 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 FAM49BQ9NUQ9 324 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 CDH9Q9ULB4 789 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.48□□□□□ -0.41
NEK9-202ENST00000553823 TFR2Q9UP52 801 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 KIAA1671Q9BY89 1806 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 ANKRD62A6NC57 917 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 M0QYV0 167 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 ATP2C2O75185 946 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 LAG3P18627 525 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 ACAT1P24752 427 aaKnown RBP12.47□□□□□ -0.41
NEK9-202ENST00000553823 TKTP29401 623 aaKnown RBP12.47□□□□□ -0.41
NEK9-202ENST00000553823 NSFP46459 744 aaKnown RBP12.47□□□□□ -0.41
NEK9-202ENST00000553823 PSMC1P62191 440 aaKnown RBP12.47□□□□□ -0.41
NEK9-202ENST00000553823 CENPCQ03188 943 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 GOLGA7BQ2TAP0 167 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 PPP1R26Q5T8A7 1209 aaPredicted RBP12.47□□□□□ -0.41
NEK9-202ENST00000553823 FAM171A1Q5VUB5 890 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 DENND1BQ6P3S1 775 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 KCNT2Q6UVM3 1135 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 TMEM173Q86WV6 379 aaPredicted RBP12.47□□□□□ -0.41
NEK9-202ENST00000553823 DNAAF5Q86Y56 855 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 HERC6Q8IVU3 1022 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 CPA5Q8WXQ8 436 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 RTP3Q9BQQ7 232 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 ACBD6Q9BR61 282 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 GPR62Q9BZJ7 368 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 TSPAN16Q9UKR8 245 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 INSL6Q9Y581 213 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 MRPL42Q9Y6G3 142 aaKnown RBP12.47□□□□□ -0.41
NEK9-202ENST00000553823 PTPRDP23468 1912 aa12.47□□□□□ -0.41
NEK9-202ENST00000553823 OAZ2O95190 189 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 ABL1P00519 1130 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 TMEM253P0C7T8 217 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 CCDC130P13994 396 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 ATP2A2P16615 1042 aaKnown RBP12.46□□□□□ -0.41
NEK9-202ENST00000553823 ABCB4P21439 1286 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 FGFR3P22607 806 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 TSPY1Q01534 308 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 INTS6LQ5JSJ4 861 aaKnown RBP12.46□□□□□ -0.41
NEK9-202ENST00000553823 RASIP1Q5U651 963 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 KIAA0319Q5VV43 1072 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.46□□□□□ -0.41
NEK9-202ENST00000553823 PHF13Q86YI8 300 aaPredicted RBP12.46□□□□□ -0.41
NEK9-202ENST00000553823 SLC39A11Q8N1S5 342 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 WDTC1Q8N5D0 677 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 COLGALT1Q8NBJ5 622 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 C1orf131Q8NDD1 294 aaKnown RBP12.46□□□□□ -0.41
NEK9-202ENST00000553823 BCL7CQ8WUZ0 217 aaPredicted RBP12.46□□□□□ -0.41
NEK9-202ENST00000553823 CTNNBL1Q8WYA6 563 aaPredicted RBP12.46□□□□□ -0.41
NEK9-202ENST00000553823 IGSF21Q96ID5 467 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 VCPIP1Q96JH7 1222 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 RAD9AQ99638 391 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 HNRNPABQ99729 332 aaKnown RBP12.46□□□□□ -0.41
NEK9-202ENST00000553823 LPIN3Q9BQK8 851 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 CRTAC1Q9NQ79 661 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 HESX1Q9UBX0 185 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 TRIM10Q9UDY6 481 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 GUCA1BQ9UMX6 200 aa12.46□□□□□ -0.41
NEK9-202ENST00000553823 A0A0A6YYK5 440 aaPredicted RBP12.45□□□□□ -0.42
NEK9-202ENST00000553823 FAM170AA1A519 330 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 MYBPHLA2RUH7 354 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 BTNL10A8MVZ5 291 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 EFEMP2O95967 443 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 SETSIPP0DME0 302 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 MYBL1P10243 752 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 ADORA2BP29275 332 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 GPD2P43304 727 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 GPC5P78333 572 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 MRPL58Q14197 206 aaKnown RBP12.45□□□□□ -0.42
NEK9-202ENST00000553823 PTPN14Q15678 1187 aa12.45□□□□□ -0.42
NEK9-202ENST00000553823 MAPRE1Q15691 268 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms