RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 E4F1Q66K89 784 aaPredicted RBP19.21■□□□□ 0.67
PSEN1-208ENST00000553719 ADGRD2Q7Z7M1 963 aa19.21■□□□□ 0.67
PSEN1-208ENST00000553719 ACOT1Q86TX2 421 aa19.21■□□□□ 0.67
PSEN1-208ENST00000553719 TNIP3Q96KP6 325 aa19.21■□□□□ 0.67
PSEN1-208ENST00000553719 LPIN3Q9BQK8 851 aa19.21■□□□□ 0.67
PSEN1-208ENST00000553719 ZSWIM1Q9BR11 485 aa19.21■□□□□ 0.67
PSEN1-208ENST00000553719 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.21■□□□□ 0.67
PSEN1-208ENST00000553719 CSPG5O95196 566 aa19.2■□□□□ 0.66
PSEN1-208ENST00000553719 SOX5P35711 763 aa19.2■□□□□ 0.66
PSEN1-208ENST00000553719 TSPY1Q01534 308 aa19.2■□□□□ 0.66
PSEN1-208ENST00000553719 BMS1Q14692 1282 aaKnown RBP19.2■□□□□ 0.66
PSEN1-208ENST00000553719 ZNF394Q53GI3 561 aa19.2■□□□□ 0.66
PSEN1-208ENST00000553719 LILRA6Q6PI73 481 aa19.2■□□□□ 0.66
PSEN1-208ENST00000553719 TMC6Q7Z403 805 aa19.2■□□□□ 0.66
PSEN1-208ENST00000553719 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.2■□□□□ 0.66
PSEN1-208ENST00000553719 MYCBPAPQ8TBZ2 947 aa19.2■□□□□ 0.66
PSEN1-208ENST00000553719 SPAG5Q96R06 1193 aa19.2■□□□□ 0.66
PSEN1-208ENST00000553719 EMILIN2Q9BXX0 1053 aa19.2■□□□□ 0.66
PSEN1-208ENST00000553719 PRRC2BQ5JSZ5 2229 aaKnown RBP19.2■□□□□ 0.66
PSEN1-208ENST00000553719 MTMR11A4FU01 709 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 LRRC53A6NM62 1247 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 CLASP2O75122 1294 aaKnown RBP19.19■□□□□ 0.66
PSEN1-208ENST00000553719 ADH1AP07327 375 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 CASP14P31944 242 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 ZBED6P86452 979 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 KCNC3Q14003 757 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 MDH1BQ5I0G3 518 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 PAQR9Q6ZVX9 377 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 CACNA2D4Q7Z3S7 1137 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 DCP1BQ8IZD4 617 aaKnown RBP19.19■□□□□ 0.66
PSEN1-208ENST00000553719 C12orf29Q8N999 325 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 MICAL1Q8TDZ2 1067 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 TFAP2BQ92481 460 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 MYLPFQ96A32 169 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 PCED1BQ96HM7 432 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 ACP6Q9NPH0 428 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 GTF3C4Q9UKN8 822 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 MTCH2Q9Y6C9 303 aa19.19■□□□□ 0.66
PSEN1-208ENST00000553719 CYP26A1O43174 497 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 KRT5P13647 590 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 CPB1P15086 417 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 STAT1P42224 750 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 CLCN4P51793 760 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 SMARCB1Q12824 385 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 MAPRE1Q15691 268 aaKnown RBP19.18■□□□□ 0.66
PSEN1-208ENST00000553719 DUSP6Q16828 381 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 CFAP221Q4G0U5 840 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 SLC39A12Q504Y0 691 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 TPGS2Q68CL5 300 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 ARHGAP17Q68EM7 881 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 RNF19BQ6ZMZ0 732 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 FUKQ8N0W3 1084 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 ZNF461Q8TAF7 563 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 OLIG1Q8TAK6 271 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 C2orf15Q8WU43 125 aaKnown RBP19.18■□□□□ 0.66
PSEN1-208ENST00000553719 SLC22A17Q8WUG5 538 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 DNAJC7Q99615 494 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 B3GNT5Q9BYG0 378 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 NSUN3Q9H649 340 aaKnown RBP19.18■□□□□ 0.66
PSEN1-208ENST00000553719 AIPL1Q9NZN9 384 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 AFF4Q9UHB7 1163 aaKnown RBP19.18■□□□□ 0.66
PSEN1-208ENST00000553719 FBXW11Q9UKB1 542 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 KIAA1257Q9ULG3 409 aa19.18■□□□□ 0.66
PSEN1-208ENST00000553719 SPTBN5Q9NRC6 3674 aaKnown RBP19.18■□□□□ 0.66
PSEN1-208ENST00000553719 O00370 1275 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 TGM5O43548 720 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 MFAP3LO75121 409 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 CALCAP01258 141 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 VDRP11473 427 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 ATF2P15336 505 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 HNRNPH3P31942 346 aaKnown RBP19.17■□□□□ 0.66
PSEN1-208ENST00000553719 NFE2Q16621 373 aaPredicted RBP19.17■□□□□ 0.66
PSEN1-208ENST00000553719 Q7L0L9 218 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 IRF2BP2Q7Z5L9 587 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 SLC47A2Q86VL8 602 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 GLYCTKQ8IVS8 523 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 EPS8L1Q8TE68 723 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 DDX1Q92499 740 aaKnown RBP19.17■□□□□ 0.66
PSEN1-208ENST00000553719 SYN2Q92777 582 aaPredicted RBP19.17■□□□□ 0.66
PSEN1-208ENST00000553719 FUBP3Q96I24 572 aaKnown RBP eCLIP19.17■□□□□ 0.66
PSEN1-208ENST00000553719 FAM161BQ96MY7 647 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 GUCD1Q96NT3 240 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 HNRNPABQ99729 332 aaKnown RBP19.17■□□□□ 0.66
PSEN1-208ENST00000553719 SYT11Q9BT88 431 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 CRISPLD1Q9H336 500 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 ABCB6Q9NP58 842 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 HSFX1Q9UBD0 423 aa19.17■□□□□ 0.66
PSEN1-208ENST00000553719 NOCTQ9UK39 431 aaKnown RBP19.17■□□□□ 0.66
PSEN1-208ENST00000553719 LUC7L2Q9Y383 392 aaKnown RBP19.17■□□□□ 0.66
PSEN1-208ENST00000553719 MTCL1Q9Y4B5 1905 aaKnown RBP19.17■□□□□ 0.66
PSEN1-208ENST00000553719 GFPT2O94808 682 aa19.16■□□□□ 0.66
PSEN1-208ENST00000553719 CCDC130P13994 396 aa19.16■□□□□ 0.66
PSEN1-208ENST00000553719 CYP11B1P15538 503 aa19.16■□□□□ 0.66
PSEN1-208ENST00000553719 GNA15P30679 374 aa19.16■□□□□ 0.66
PSEN1-208ENST00000553719 CA8P35219 290 aa19.16■□□□□ 0.66
PSEN1-208ENST00000553719 USP8P40818 1118 aa19.16■□□□□ 0.66
PSEN1-208ENST00000553719 PRKCIP41743 596 aa19.16■□□□□ 0.66
PSEN1-208ENST00000553719 SGO2Q562F6 1265 aa19.16■□□□□ 0.66
PSEN1-208ENST00000553719 PPP1R26Q5T8A7 1209 aaPredicted RBP19.16■□□□□ 0.66
PSEN1-208ENST00000553719 SLC2A14Q8TDB8 520 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms