RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ASPAP45381 313 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 SLCO1A2P46721 670 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 SLC18A1P54219 525 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 LACTBP83111 547 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-205ENST00000553474 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-205ENST00000553474 HADHQ16836 314 aaKnown RBP13.62□□□□□ -0.23
SHMT2-205ENST00000553474 ANKRD20A8PQ5CZ79 823 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 ZBTB33Q86T24 672 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 CCDC13Q8IYE1 715 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 CCT6BQ92526 530 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 PARK7Q99497 189 aaKnown RBP13.62□□□□□ -0.23
SHMT2-205ENST00000553474 BCO2Q9BYV7 579 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 MROH8Q9H579 483 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 VRTNQ9H8Y1 702 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 PCDH9Q9HC56 1237 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 SENP1Q9P0U3 644 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 ZNF148Q9UQR1 794 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 P4HA1P13674 534 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 VCPP55072 806 aaKnown RBP13.61□□□□□ -0.23
SHMT2-205ENST00000553474 INHBEP58166 350 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 ZNF252P-AS1Q0IIN9 211 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 KCTD2Q14681 263 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 OASLQ15646 514 aaKnown RBP13.61□□□□□ -0.23
SHMT2-205ENST00000553474 LY6KQ17RY6 165 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 P3H1Q32P28 736 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 PPP1R21Q6ZMI0 780 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 PHLDB2Q86SQ0 1253 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 IFNLR1Q8IU57 520 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-205ENST00000553474 GBP7Q8N8V2 638 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-205ENST00000553474 DYDC1Q8WWB3 177 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 SGSM3Q96HU1 749 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 RBM15Q96T37 977 aaKnown RBP eCLIP13.61□□□□□ -0.23
SHMT2-205ENST00000553474 PRMT1Q99873 361 aaKnown RBP13.61□□□□□ -0.23
SHMT2-205ENST00000553474 OSBPL7Q9BZF2 842 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 MIS12Q9H081 205 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 ASB7Q9H672 318 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 RPF1Q9H9Y2 349 aaKnown RBP13.61□□□□□ -0.23
SHMT2-205ENST00000553474 CYP3A43Q9HB55 503 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 FETUBQ9UGM5 382 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 TPX2Q9ULW0 747 aaKnown RBP13.61□□□□□ -0.23
SHMT2-205ENST00000553474 IVNS1ABPQ9Y6Y0 642 aa13.61□□□□□ -0.23
SHMT2-205ENST00000553474 TMEM120BA0PK00 339 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 O00370 1275 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 ATF7P17544 494 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-205ENST00000553474 CDKN2BP42772 138 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 MAGEA4P43358 317 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 TFAMQ00059 246 aaKnown RBP13.6□□□□□ -0.23
SHMT2-205ENST00000553474 ZNF268Q14587 947 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-205ENST00000553474 TRIP13Q15645 432 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-205ENST00000553474 KCTD19Q17RG1 926 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-205ENST00000553474 SEZ6Q53EL9 994 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 ZNF667Q5HYK9 610 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 ZNF484Q5JVG2 852 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 ZFYVE27Q5T4F4 411 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 CCDC62Q6P9F0 684 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 MFSD7Q6UXD7 560 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 THNSL1Q8IYQ7 743 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 UHMK1Q8TAS1 419 aaKnown RBP13.6□□□□□ -0.23
SHMT2-205ENST00000553474 GRAMD1AQ96CP6 724 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 SPATA33Q96N06 139 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 EURLQ9NYK6 297 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 SLC45A1Q9Y2W3 748 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 MGAMO43451 1857 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 ASB14A6NK59 587 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 CCT8L1PA6NM43 557 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 MAGEB2O15479 319 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 CNMDO75829 334 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-205ENST00000553474 VIMP08670 466 aaKnown RBP13.6□□□□□ -0.23
SHMT2-205ENST00000553474 MCF2P10911 925 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 KRT3P12035 628 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 PHKA2P46019 1235 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 TM4SF4P48230 202 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 TTLL4Q14679 1199 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 LLGL1Q15334 1064 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 TAZQ16635 292 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 CCDC142Q17RM4 750 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 VSTM1Q6UX27 236 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 NT5DC4Q86YG4 428 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 RHPN2Q8IUC4 686 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 LRRC34Q8IZ02 419 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 WDTC1Q8N5D0 677 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 SHCBP1Q8NEM2 672 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 GTF3C2Q8WUA4 911 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-205ENST00000553474 ERAP1Q9NZ08 941 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 DNPEPQ9ULA0 475 aa13.6□□□□□ -0.23
SHMT2-205ENST00000553474 EVPLQ92817 2033 aa13.59□□□□□ -0.23
SHMT2-205ENST00000553474 F8VP50 259 aa13.59□□□□□ -0.23
SHMT2-205ENST00000553474 INO80B-WBP1J3KQ70 363 aa13.59□□□□□ -0.23
SHMT2-205ENST00000553474 DNAJC8O75937 253 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-205ENST00000553474 ARIH2O95376 493 aa13.59□□□□□ -0.23
SHMT2-205ENST00000553474 STAU1O95793 577 aaKnown RBP13.59□□□□□ -0.23
SHMT2-205ENST00000553474 BRAFP15056 766 aa13.59□□□□□ -0.23
SHMT2-205ENST00000553474 MAP2K2P36507 400 aa13.59□□□□□ -0.23
SHMT2-205ENST00000553474 ARSEP51690 589 aa13.59□□□□□ -0.23
SHMT2-205ENST00000553474 MBTD1Q05BQ5 628 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms