RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ZCCHC14Q8WYQ9 949 aaKnown RBP6.59□□□□□ -1.35
SCFD1-208ENST00000553278 TRAPPC9Q96Q05 1148 aa6.59□□□□□ -1.35
SCFD1-208ENST00000553278 OR10A2Q9H208 303 aa6.59□□□□□ -1.35
SCFD1-208ENST00000553278 KCNH6Q9H252 994 aa6.59□□□□□ -1.35
SCFD1-208ENST00000553278 SLC6A15Q9H2J7 730 aa6.59□□□□□ -1.35
SCFD1-208ENST00000553278 ZNF552Q9H707 407 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-208ENST00000553278 ZBTB26Q9HCK0 441 aa6.59□□□□□ -1.35
SCFD1-208ENST00000553278 XPNPEP3Q9NQH7 507 aa6.59□□□□□ -1.35
SCFD1-208ENST00000553278 NCDNQ9UBB6 729 aa6.59□□□□□ -1.35
SCFD1-208ENST00000553278 DTNAQ9Y4J8 743 aa6.59□□□□□ -1.35
SCFD1-208ENST00000553278 AQP7P3A6NL99 342 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 CXorf49A8MYA2 514 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-208ENST00000553278 PJA2O43164 708 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 DNPH1O43598 174 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 TMCC2O75069 709 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 ZBED4O75132 1171 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 PRKCBP05771 671 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 CKBP12277 381 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 JUPP14923 745 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 PECAM1P16284 738 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-208ENST00000553278 RXRAP19793 462 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 RRM1P23921 792 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 SLC6A4P31645 630 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 ATICP31939 592 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 IL13P35225 146 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 VIPR2P41587 438 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 BCAT1P54687 386 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 NCKAP1LP55160 1127 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 MLLT6P55198 1093 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-208ENST00000553278 CHRNDQ07001 517 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 CCDC96Q2M329 555 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 FAM133BQ5BKY9 247 aaKnown RBP6.58□□□□□ -1.36
SCFD1-208ENST00000553278 PRSS36Q5K4E3 855 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 UTP14CQ5TAP6 766 aaKnown RBP6.58□□□□□ -1.36
SCFD1-208ENST00000553278 FYB2Q5VWT5 728 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 RAB11FIP2Q7L804 512 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 UBE3BQ7Z3V4 1068 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 FRMD5Q7Z6J6 570 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 REXO1L1PQ8IX06 675 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 NRSN1Q8IZ57 195 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 CMTM4Q8IZR5 234 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 ANKRD53Q8N9V6 530 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 SCAMP5Q8TAC9 235 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 RFFLQ8WZ73 363 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 ZBTB8AQ96BR9 441 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 C7orf26Q96N11 449 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 TREX2Q9BQ50 279 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-208ENST00000553278 LSM14BQ9BX40 385 aaKnown RBP6.58□□□□□ -1.36
SCFD1-208ENST00000553278 CARD11Q9BXL7 1154 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 FAM83DQ9H4H8 585 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 TMEM160Q9NX00 188 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 TMOD4Q9NZQ9 345 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 SLC45A2Q9UMX9 530 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 ARHGAP26Q9UNA1 814 aa6.58□□□□□ -1.36
SCFD1-208ENST00000553278 A0A0U1RQG5 324 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-208ENST00000553278 KIAA1324LA8MWY0 1029 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-208ENST00000553278 H0Y3Z8 333 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 H7C4K7 107 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 ORC4O43929 436 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 NTSR2O95665 410 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 POMCP01189 267 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 ZSCAN22P10073 491 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-208ENST00000553278 ITGB5P18084 799 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 COPB2P35606 906 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 ATXN1P54253 815 aaKnown RBP6.57□□□□□ -1.36
SCFD1-208ENST00000553278 DCAF7P61962 342 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 ATP2C1P98194 919 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-208ENST00000553278 SATB1Q01826 763 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 DUSP8Q13202 625 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 ZNF827Q17R98 1081 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 VWA3BQ502W6 1294 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 MAP3K21Q5TCX8 1036 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 ZNF605Q86T29 641 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 RASGRP3Q8IV61 690 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 TMEM57Q8N5G2 664 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 FAM46DQ8NEK8 389 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 DNERQ8NFT8 737 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 OR1N1Q8NGS0 311 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 ADAMTS18Q8TE60 1221 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 NEIL1Q96FI4 390 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-208ENST00000553278 TIGD1Q96MW7 591 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 NOX5Q96PH1 765 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 TWSG1Q9GZX9 223 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 KIAA1683Q9H0B3 1180 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 L2HGDHQ9H9P8 463 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 NOD2Q9HC29 1040 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 LPAR3Q9UBY5 353 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 JAG2Q9Y219 1238 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 PCDHA5Q9Y5H7 936 aa6.57□□□□□ -1.36
SCFD1-208ENST00000553278 FSD2A1L4K1 749 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 SRGAP2BP0DMP2 458 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 SSTR4P31391 388 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 PTDSS1P48651 473 aaKnown RBP6.56□□□□□ -1.36
SCFD1-208ENST00000553278 CCR5P51681 352 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 ADCY7P51828 1080 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 SEC24CP53992 1094 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 RRADP55042 308 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 NPEPPSP55786 919 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 RAP2BP61225 183 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 NPY5RQ15761 445 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms