RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 NOA1Q8NC60 698 aaKnown RBP10.42□□□□□ -0.74
TMEM116-216ENST00000552800 C3orf20Q8ND61 904 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 FEZF2Q8TBJ5 459 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 ZNF564Q8TBZ8 553 aaPredicted RBP10.42□□□□□ -0.74
TMEM116-216ENST00000552800 RAET1EQ8TD07 263 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 ZNF296Q8WUU4 475 aaPredicted RBP10.42□□□□□ -0.74
TMEM116-216ENST00000552800 MCRS1Q96EZ8 462 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 GLT1D1Q96MS3 346 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 NUP85Q9BW27 656 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 NT5C1AQ9BXI3 368 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 TRIM6Q9C030 488 aaPredicted RBP10.42□□□□□ -0.74
TMEM116-216ENST00000552800 ELOVL4Q9GZR5 314 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 MIS12Q9H081 205 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 NXF3Q9H4D5 531 aaKnown RBP10.42□□□□□ -0.74
TMEM116-216ENST00000552800 PAK6Q9NQU5 681 aaPredicted RBP10.42□□□□□ -0.74
TMEM116-216ENST00000552800 CTTNBP2NLQ9P2B4 639 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.42□□□□□ -0.74
TMEM116-216ENST00000552800 PIN4Q9Y237 131 aaKnown RBP10.42□□□□□ -0.74
TMEM116-216ENST00000552800 EFR3BQ9Y2G0 817 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 PCDHB3Q9Y5E6 796 aa10.42□□□□□ -0.74
TMEM116-216ENST00000552800 TMCO5BA8MYB1 307 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 KPNA7A9QM74 516 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 MYO1FO00160 1098 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 ARVCFO00192 962 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 THAP12O43422 761 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 FTCDO95954 541 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 COMTP21964 271 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 WARSP23381 471 aaKnown RBP10.41□□□□□ -0.74
TMEM116-216ENST00000552800 DRG2P55039 364 aaKnown RBP10.41□□□□□ -0.74
TMEM116-216ENST00000552800 LILRA4P59901 499 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 PIGHQ14442 188 aaPredicted RBP10.41□□□□□ -0.74
TMEM116-216ENST00000552800 SOWAHAQ2M3V2 549 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 FBXO38Q6PIJ6 1188 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 UBL4BQ8N7F7 174 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 CAGE1Q8TC20 777 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 SLC35F5Q8WV83 523 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 TSC1Q92574 1164 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 SLCO2A1Q92959 643 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 ZNF653Q96CK0 615 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 ZNF560Q96MR9 790 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 UBXN6Q9BZV1 441 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 DNAI2Q9GZS0 605 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 CXCL16Q9H2A7 254 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 AGO3Q9H9G7 860 aaKnown RBP10.41□□□□□ -0.74
TMEM116-216ENST00000552800 RGS18Q9NS28 235 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 ARGLU1Q9NWB6 273 aaPredicted RBP10.41□□□□□ -0.74
TMEM116-216ENST00000552800 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.41□□□□□ -0.74
TMEM116-216ENST00000552800 PUF60Q9UHX1 559 aaKnown RBP10.41□□□□□ -0.74
TMEM116-216ENST00000552800 PADI3Q9ULW8 664 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 L1RE1Q9UN81 338 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 POLIQ9UNA4 740 aa10.41□□□□□ -0.74
TMEM116-216ENST00000552800 PGRMC1O00264 195 aaKnown RBP10.4□□□□□ -0.74
TMEM116-216ENST00000552800 DNM1LO00429 736 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 KCNK3O14649 394 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 FSCN2O14926 492 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 TLR3O15455 904 aaKnown RBP10.4□□□□□ -0.74
TMEM116-216ENST00000552800 NCK2O43639 380 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 PARNO95453 639 aaKnown RBP10.4□□□□□ -0.74
TMEM116-216ENST00000552800 TFRCP02786 760 aaKnown RBP10.4□□□□□ -0.74
TMEM116-216ENST00000552800 INHAP05111 366 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 KRT19P08727 400 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 PTPN7P35236 360 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 TAF6P49848 677 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 CDH8P55286 799 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 USP46P62068 366 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 TNNC1P63316 161 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 LPIN1Q14693 890 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 BEND6Q5SZJ8 279 aaPredicted RBP10.4□□□□□ -0.74
TMEM116-216ENST00000552800 DCAF12L1Q5VU92 463 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 NAA35Q5VZE5 725 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 CCNI2Q6ZMN8 369 aaPredicted RBP10.4□□□□□ -0.74
TMEM116-216ENST00000552800 AGMOQ6ZNB7 445 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 DNAAF5Q86Y56 855 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 ZDHHC17Q8IUH5 632 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 TMEM86AQ8N2M4 240 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 KBTBD7Q8WVZ9 684 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 CPA5Q8WXQ8 436 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 ALG3Q92685 438 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 HLA-CQ95604 372 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 ELMO3Q96BJ8 720 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 PGBD4Q96DM1 585 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 C18orf8Q96DM3 657 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 PKNOX2Q96KN3 472 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 TWNKQ96RR1 684 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 NCAPGQ9BPX3 1015 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 FTHL17Q9BXU8 183 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 SLITRK6Q9H5Y7 841 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 ELAC1Q9H777 363 aaKnown RBP10.4□□□□□ -0.74
TMEM116-216ENST00000552800 SMYD3Q9H7B4 428 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 GDF3Q9NR23 364 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
TMEM116-216ENST00000552800 IP6K2Q9UHH9 426 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 OGDHLQ9ULD0 1010 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 CEP83Q9Y592 693 aa10.4□□□□□ -0.74
TMEM116-216ENST00000552800 MAP2K7O14733 419 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 HOXA2O43364 376 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 PSTPIP1O43586 416 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 GFRA3O60609 400 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 CYP11A1P05108 521 aa10.39□□□□□ -0.75
TMEM116-216ENST00000552800 THP07101 528 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms