RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 POLR3GLQ9BT43 218 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 BTBD2Q9BX70 525 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 WNT8AQ9H1J5 351 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 MYH16Q9H6N6 1097 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 IPPKQ9H8X2 491 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 DDX4Q9NQI0 724 aaKnown RBP2.83□□□□□ -1.96
PTCH1-223ENST00000551623 STARD7Q9NQZ5 370 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.83□□□□□ -1.96
PTCH1-223ENST00000551623 TRAF6Q9Y4K3 522 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 CTDP1Q9Y5B0 961 aaPredicted RBP2.83□□□□□ -1.96
PTCH1-223ENST00000551623 SYNRGQ9UMZ2 1314 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 MAPK8IP3Q9UPT6 1336 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 ZFYVE26Q68DK2 2539 aa2.83□□□□□ -1.96
PTCH1-223ENST00000551623 MAP1BP46821 2468 aaKnown RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 GPR75-ASB3A0A0A6YYF3 556 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 A0A0U1RQG5 324 aaPredicted RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 TMEM221A6NGB7 291 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 FAM90A27PA6NNH2 459 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 M0R296 226 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 ARVCFO00192 962 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 PRODHO43272 600 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 NCK2O43639 380 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 DUSP11O75319 330 aaKnown RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 BAIAP3O94812 1187 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 PDE8BO95263 885 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 PGK1P00558 417 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 AMY2AP04746 511 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 AKR1A1P14550 325 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 AMY2BP19961 511 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 KCNA5P22460 613 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 AVPR2P30518 371 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 MC4RP32245 332 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 CYP2C18P33260 490 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 PTH2RP49190 550 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 ERVK-21P61565 698 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 ATP2C1P98194 919 aaPredicted RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 SIGLEC14Q08ET2 396 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 FXNQ16595 210 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 RABL6Q3YEC7 729 aaPredicted RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 TM4SF20Q53R12 229 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 CCDC30Q5VVM6 783 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 C1QL3Q5VWW1 255 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 KANK2Q63ZY3 851 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 FAM111BQ6SJ93 734 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 RSPO2Q6UXX9 243 aaPredicted RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 CATSPERGQ6ZRH7 1159 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 DGLUCYQ7Z3D6 616 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 HERC6Q8IVU3 1022 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 SRRM1Q8IYB3 904 aaKnown RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 MAGEB6Q8N7X4 407 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 MB21D1Q8N884 522 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 PCSK9Q8NBP7 692 aaKnown RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 KCTD13Q8WZ19 329 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 MRPL38Q96DV4 380 aaKnown RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 GLT1D1Q96MS3 346 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 TANGO6Q9C0B7 1094 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 HIPK3Q9H422 1215 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 MROH8Q9H579 483 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 DNAJC18Q9H819 358 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 RIC8BQ9NVN3 520 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 IFT57Q9NWB7 429 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 SLC5A4Q9NY91 659 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 TMOD4Q9NZQ9 345 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 BTBD7Q9P203 1132 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 MUTYHQ9UIF7 546 aa2.82□□□□□ -1.96
PTCH1-223ENST00000551623 EP300Q09472 2414 aaPredicted RBP2.82□□□□□ -1.96
PTCH1-223ENST00000551623 OTOGLQ3ZCN5 2332 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 CEP295Q9C0D2 2601 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 VPS13AQ96RL7 3174 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 DNAH14Q0VDD8 3507 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 MYO15AQ9UKN7 3530 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 CENPVL1A0A0U1RR11 272 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 LOC730098B7Z3J9 87 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 IGSF3O75054 1194 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 CABYRO75952 493 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 ZFPL1O95159 310 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 EYA4O95677 639 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 SOD2P04179 222 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 ASGR1P07306 291 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 C6orf222P0C671 652 aaPredicted RBP2.81□□□□□ -1.96
PTCH1-223ENST00000551623 PTPN1P18031 435 aaKnown RBP2.81□□□□□ -1.96
PTCH1-223ENST00000551623 VCAM1P19320 739 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 ZFP36P26651 326 aaKnown RBP2.81□□□□□ -1.96
PTCH1-223ENST00000551623 AOAHP28039 575 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 RFC2P35250 354 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 ZEB1P37275 1124 aaPredicted RBP2.81□□□□□ -1.96
PTCH1-223ENST00000551623 ADCY7P51828 1080 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 VCPP55072 806 aaKnown RBP2.81□□□□□ -1.96
PTCH1-223ENST00000551623 RBL2Q08999 1139 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 ADAM15Q13444 863 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 PUM3Q15397 648 aaKnown RBP2.81□□□□□ -1.96
PTCH1-223ENST00000551623 ST3GAL2Q16842 350 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 KIZQ2M2Z5 673 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 ERCC6LQ2NKX8 1250 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 CCDC57Q2TAC2 916 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 GRAMD4Q6IC98 578 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 LMBR1LQ6UX01 489 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 ANKS3Q6ZW76 656 aa2.81□□□□□ -1.96
PTCH1-223ENST00000551623 SPATC1Q76KD6 591 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms