RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ROR1Q01973 937 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 SMC1AQ14683 1233 aaKnown RBP14.39□□□□□ -0.11
ERBB3-215ENST00000550828 INTS6LQ5JSJ4 861 aaKnown RBP14.39□□□□□ -0.11
ERBB3-215ENST00000550828 PDXDC1Q6P996 788 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 UNC93AQ86WB7 457 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 GLYCTKQ8IVS8 523 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 TTC9BQ8N6N2 239 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 C12orf29Q8N999 325 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 B3GALNT2Q8NCR0 500 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 OLIG1Q8TAK6 271 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 ADAMTS19Q8TE59 1207 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 JAKMIP2Q96AA8 810 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 MRPL38Q96DV4 380 aaKnown RBP14.39□□□□□ -0.11
ERBB3-215ENST00000550828 KLHL5Q96PQ7 755 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 ASB2Q96Q27 587 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 LMAN2LQ9H0V9 348 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 CRISPLD1Q9H336 500 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 MRPL17Q9NRX2 175 aaKnown RBP14.39□□□□□ -0.11
ERBB3-215ENST00000550828 TMEM30AQ9NV96 361 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 FNIP2Q9P278 1114 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 CDH9Q9ULB4 789 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 CDY1Q9Y6F8 540 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 NOTCH4Q99466 2003 aa14.39□□□□□ -0.11
ERBB3-215ENST00000550828 EYSQ5T1H1 3165 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 A0A1W2PQJ5 194 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 OR6C75A6NL08 312 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 H7C4K7 107 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 CYP26A1O43174 497 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 KRT5P13647 590 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 CCDC130P13994 396 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 PTPN1P18031 435 aaKnown RBP14.38□□□□□ -0.11
ERBB3-215ENST00000550828 OR1D2P34982 312 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 MRE11P49959 708 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 MRPS5P82675 430 aaKnown RBP14.38□□□□□ -0.11
ERBB3-215ENST00000550828 FAM171BQ6P995 826 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 RNF19BQ6ZMZ0 732 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 PAQR9Q6ZVX9 377 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 CRYBG2Q8N1P7 616 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 CPLX3Q8WVH0 158 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 NT5C1AQ9BXI3 368 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 B3GNT5Q9BYG0 378 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 RHOBTB2Q9BYZ6 727 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 FAM124BQ9H5Z6 455 aaPredicted RBP14.38□□□□□ -0.11
ERBB3-215ENST00000550828 FAM49BQ9NUQ9 324 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 STK39Q9UEW8 545 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 GTF3C4Q9UKN8 822 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 CAPN11Q9UMQ6 739 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 DAAM1Q9Y4D1 1078 aa14.38□□□□□ -0.11
ERBB3-215ENST00000550828 LRRC53A6NM62 1247 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 CLDN5O00501 218 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 CLASP2O75122 1294 aaKnown RBP14.37□□□□□ -0.11
ERBB3-215ENST00000550828 GFPT2O94808 682 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 CFHP08603 1231 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 BRD2P25440 801 aaKnown RBP14.37□□□□□ -0.11
ERBB3-215ENST00000550828 PCSK1P29120 753 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 CASP14P31944 242 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 GTF2F1P35269 517 aaKnown RBP eCLIP14.37□□□□□ -0.11
ERBB3-215ENST00000550828 SOX5P35711 763 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 CACNA2D1P54289 1103 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 ARPP19P56211 112 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 YWHAEP62258 255 aaKnown RBP14.37□□□□□ -0.11
ERBB3-215ENST00000550828 RBM10P98175 930 aaKnown RBP14.37□□□□□ -0.11
ERBB3-215ENST00000550828 RAB33AQ14088 237 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 SLC39A12Q504Y0 691 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 MDH1BQ5I0G3 518 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 SLC47A2Q86VL8 602 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 FUKQ8N0W3 1084 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 THEM5Q8N1Q8 247 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 VN1R2Q8NFZ6 395 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 MYLPFQ96A32 169 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 PCED1BQ96HM7 432 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 TMEM176AQ96HP8 235 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 FAM81BQ96LP2 452 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 PGLYRP2Q96PD5 576 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 NUP58Q9BVL2 599 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 EDEM3Q9BZQ6 932 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 NGRNQ9NPE2 291 aaKnown RBP14.37□□□□□ -0.11
ERBB3-215ENST00000550828 ANAPC1Q9H1A4 1944 aa14.37□□□□□ -0.11
ERBB3-215ENST00000550828 MTMR11A4FU01 709 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 PER2O15055 1255 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 SSTR3P32745 418 aaPredicted RBP14.36□□□□□ -0.11
ERBB3-215ENST00000550828 CA8P35219 290 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 USP8P40818 1118 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 NDUFV1P49821 464 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 GPR17Q13304 367 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 ARID5BQ14865 1188 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 PDE12Q6L8Q7 609 aaKnown RBP14.36□□□□□ -0.11
ERBB3-215ENST00000550828 LILRA6Q6PI73 481 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 CACNA2D4Q7Z3S7 1137 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 IRF2BP2Q7Z5L9 587 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 NOP9Q86U38 636 aaKnown RBP14.36□□□□□ -0.11
ERBB3-215ENST00000550828 TTC39CQ8N584 583 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 ATAD1Q8NBU5 361 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 FEZF2Q8TBJ5 459 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 MYCBPAPQ8TBZ2 947 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 SLC22A17Q8WUG5 538 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 SLC20A1Q8WUM9 679 aa14.36□□□□□ -0.11
ERBB3-215ENST00000550828 DDX1Q92499 740 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms