RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PIH1D1Q9NWS0 290 aaKnown RBP11.7□□□□□ -0.54
LINC00661-204ENST00000549354 HAO1Q9UJM8 370 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 MCM3APO60318 1980 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 A0A0B4J269 797 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 LRRD1A4D1F6 860 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 MIF4GDA9UHW6 222 aaKnown RBP11.7□□□□□ -0.54
LINC00661-204ENST00000549354 RTN2O75298 545 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 PDHA1P08559 390 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 ATF2P15336 505 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 PIK3CAP42336 1068 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 NSFP46459 744 aaKnown RBP11.7□□□□□ -0.54
LINC00661-204ENST00000549354 EFNA5P52803 228 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 COPS2P61201 443 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 FMO1Q01740 532 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 STRN3Q13033 797 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 CDO1Q16878 200 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 FAM110CQ1W6H9 321 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 CRELD2Q6UXH1 353 aaPredicted RBP11.7□□□□□ -0.54
LINC00661-204ENST00000549354 DEPTORQ8TB45 409 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 ERP27Q96DN0 273 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 HAPLN2Q9GZV7 340 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 NKIRAS1Q9NYS0 192 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 NAALADL1Q9UQQ1 740 aa11.7□□□□□ -0.54
LINC00661-204ENST00000549354 K7ERI5 159 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 ZC3H11AO75152 810 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00661-204ENST00000549354 HOXD8P13378 290 aaPredicted RBP11.69□□□□□ -0.54
LINC00661-204ENST00000549354 GCKP35557 465 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 LIG4P49917 911 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 MGAT5Q09328 741 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 IRF5Q13568 498 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 MXD4Q14582 209 aaPredicted RBP11.69□□□□□ -0.54
LINC00661-204ENST00000549354 SEPT7Q16181 437 aaKnown RBP11.69□□□□□ -0.54
LINC00661-204ENST00000549354 P3H1Q32P28 736 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 TXNRD3NBQ6F5E7 133 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 THNSL1Q8IYQ7 743 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 EMC1Q8N766 993 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 ART4Q93070 314 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 PARK7Q99497 189 aaKnown RBP11.69□□□□□ -0.54
LINC00661-204ENST00000549354 PCYOX1Q9UHG3 505 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 PCDHA3Q9Y5H8 950 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 SRRM3A6NNA2 597 aaPredicted RBP11.69□□□□□ -0.54
LINC00661-204ENST00000549354 NOP56O00567 594 aaKnown RBP11.69□□□□□ -0.54
LINC00661-204ENST00000549354 HBP1O60381 514 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 GHRP10912 638 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 MSH2P43246 934 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 IGBP1P78318 339 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 FAXCQ5TGI0 409 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 BSPRYQ5W0U4 402 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 CST9Q5W186 159 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 SMYD5Q6GMV2 418 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 FAM71AQ8IYT1 594 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 PRPF31Q8WWY3 499 aaKnown RBP11.69□□□□□ -0.54
LINC00661-204ENST00000549354 CENPTQ96BT3 561 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 ZNF570Q96NI8 536 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 TMEM121Q9BTD3 319 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 TARS2Q9BW92 718 aaKnown RBP11.69□□□□□ -0.54
LINC00661-204ENST00000549354 C15orf41Q9Y2V0 281 aa11.69□□□□□ -0.54
LINC00661-204ENST00000549354 SGK1O00141 431 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 CELF2O95319 508 aaKnown RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 CBX6O95503 412 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 SNAI1O95863 264 aaPredicted RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 LDHAP00338 332 aaKnown RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 FOXN2P32314 431 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 CPA2P48052 419 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 TAS2R40P59535 323 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 POU5F1BQ06416 359 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 ITIH4Q14624 930 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 TMEM63BQ5T3F8 832 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 GPR142Q7Z601 462 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 ANKS1BQ7Z6G8 1248 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 ZBED8Q8IZ13 594 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 PPTC7Q8NI37 304 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 HELQQ8TDG4 1101 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 COPS5Q92905 334 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 STMN4Q9H169 189 aaPredicted RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 RAB20Q9NX57 234 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 ADAM22Q9P0K1 906 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 PARP2Q9UGN5 583 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 ZMYND8Q9ULU4 1186 aaPredicted RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 MSCO60682 206 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 EDN1P05305 212 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 F7P08709 466 aaPredicted RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 GPS1Q13098 491 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 EFTUD2Q15029 972 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 TCEAL1Q15170 157 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 PPP2R5EQ16537 467 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 LINC01465Q8N7H1 131 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 FBXL13Q8NEE6 735 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 SHC3Q92529 594 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 NFKBIZQ9BYH8 718 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 TRIM6Q9C030 488 aaPredicted RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 YIPF3Q9GZM5 350 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 TJP2Q9UDY2 1190 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 AGO2Q9UKV8 859 aaKnown RBP11.68□□□□□ -0.54
LINC00661-204ENST00000549354 TP73O15350 636 aa11.68□□□□□ -0.54
LINC00661-204ENST00000549354 FAM189A1O60320 539 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms