RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FAM213AQ9BRX8 229 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 TRIM55Q9BYV6 548 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 PPP1R12CQ9BZL4 782 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 MRPL47Q9HD33 250 aaKnown RBP14.44□□□□□ -0.1
HDAC7-228ENST00000548938 SSU72Q9NP77 194 aaKnown RBP14.44□□□□□ -0.1
HDAC7-228ENST00000548938 CPSF2Q9P2I0 782 aaKnown RBP14.44□□□□□ -0.1
HDAC7-228ENST00000548938 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.44□□□□□ -0.1
HDAC7-228ENST00000548938 SCOCQ9UIL1 159 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 NFASCO94856 1347 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 TCP10L2B9ZVM9 353 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 ZBED4O75132 1171 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 SKIP12755 728 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 GTF2H1P32780 548 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 PSMC4P43686 418 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 DLGAP5Q15398 846 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 OASLQ15646 514 aaKnown RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 MSS51Q4VC12 460 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 XKR9Q5GH70 373 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 TXNRD3NBQ6F5E7 133 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 PLEKHA7Q6IQ23 1121 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 DRICH1Q6PGQ1 229 aaPredicted RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 LDHDQ86WU2 507 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 NIM1KQ8IY84 436 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 VPS52Q8N1B4 723 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 MZB1Q8WU39 189 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 SKA1Q96BD8 255 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 NSL1Q96IY1 281 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 CSRNP1Q96S65 589 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 WDR83Q9BRX9 315 aaKnown RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 TMEM120AQ9BXJ8 343 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 VPS33BQ9H267 617 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 MANSC1Q9H8J5 431 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 WASF2Q9Y6W5 498 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 SGK1O00141 431 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 ATP2A1O14983 1001 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 TJP3O95049 919 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 ARFIP2P53365 341 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 VCPP55072 806 aaKnown RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 ZBTB16Q05516 673 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 DALRD3Q5D0E6 543 aaKnown RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 ANKRD22Q5VYY1 191 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 KBTBD2Q8IY47 623 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 TAB3Q8N5C8 712 aaPredicted RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 RBM41Q96IZ5 413 aaKnown RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 TSSK1BQ9BXA7 367 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 C10orf88Q9H8K7 445 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 PPCSQ9HAB8 311 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 AGO4Q9HCK5 861 aaKnown RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 TAS2R1Q9NYW7 299 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 WDR35Q9P2L0 1181 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 PPP1R1BQ9UD71 204 aaPredicted RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 IVNS1ABPQ9Y6Y0 642 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 PSME4Q14997 1843 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 PLCB3Q01970 1234 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 CXCL9Q07325 125 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 DMP1Q13316 513 aaPredicted RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 SPOCD1Q6ZMY3 1216 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 RCOR2Q8IZ40 523 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 BANPQ8N9N5 519 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 KCNK13Q9HB14 408 aa14.43□□□□□ -0.1
HDAC7-228ENST00000548938 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
HDAC7-228ENST00000548938 SMAPO00193 183 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 HNRNPDLO14979 420 aaKnown RBP14.42□□□□□ -0.1
HDAC7-228ENST00000548938 LYPLA2O95372 231 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 ACO1P21399 889 aaKnown RBP14.42□□□□□ -0.1
HDAC7-228ENST00000548938 WNT7BP56706 349 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 CDK16Q00536 496 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 ZNF252P-AS1Q0IIN9 211 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 TKFCQ3LXA3 575 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 FNBP1LQ5T0N5 605 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 RFX8Q6ZV50 586 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 USP37Q86T82 979 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 GPD1LQ8N335 351 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 FEZF2Q8TBJ5 459 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 RNF217Q8TC41 542 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 PYROXD1Q8WU10 500 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 STMN2Q93045 179 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 SYNCQ9H7C4 482 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 KMT5AQ9NQR1 393 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 TMOD2Q9NZR1 351 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 SCINQ9Y6U3 715 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 ZC3H11AO75152 810 aaKnown RBP eCLIP14.42□□□□□ -0.13e-9■■■■■ 28.8
HDAC7-228ENST00000548938 HLA-DRAP01903 254 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 GNA15P30679 374 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 CACNA2D1P54289 1103 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 BPIFB4P59827 614 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 ADGRD1Q6QNK2 874 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 TMEM270Q6UE05 265 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 C15orf39Q6ZRI6 1047 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 ABRAQ8N0Z2 381 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 SENP7Q9BQF6 1050 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 DHRS4Q9BTZ2 278 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 VPS11Q9H270 941 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 PCDH9Q9HC56 1237 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 KRT82Q9NSB4 513 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 ARMCX1Q9P291 453 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 STX18Q9P2W9 335 aaKnown RBP14.42□□□□□ -0.1
HDAC7-228ENST00000548938 TMX2Q9Y320 296 aa14.42□□□□□ -0.1
HDAC7-228ENST00000548938 FARP1Q9Y4F1 1045 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms