RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SCFD1Q8WVM8 642 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 MSANTD3Q96H12 275 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 MKNK1Q9BUB5 465 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 ABCB6Q9NP58 842 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 SLC39A2Q9NP94 309 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 TMLHEQ9NVH6 421 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 CGNQ9P2M7 1197 aaKnown RBP21.34■■□□□ 1.01
CHD4-213ENST00000545584 FBXO4Q9UKT5 387 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 R4GN57 208 aa21.34■■□□□ 1.01
CHD4-213ENST00000545584 PTPRZ1P23471 2315 aaPredicted RBP21.34■■□□□ 1.01
CHD4-213ENST00000545584 CACNA1IQ9P0X4 2223 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 CLIC2O15247 247 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 CSH1P0DML2 217 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 CSH2P0DML3 217 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 DLATP10515 647 aaKnown RBP21.33■■□□□ 1.01
CHD4-213ENST00000545584 TNNI1P19237 187 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 WEE1P30291 646 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 CYP2J2P51589 502 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 MLLT6P55198 1093 aaPredicted RBP21.33■■□□□ 1.01
CHD4-213ENST00000545584 FCHO2Q0JRZ9 810 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 CUL4BQ13620 913 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 ARHGAP29Q52LW3 1261 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 SPATA2LQ8IUW3 424 aaPredicted RBP21.33■■□□□ 1.01
CHD4-213ENST00000545584 RSPRY1Q96DX4 576 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 IL21Q9HBE4 155 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 GTF3C4Q9UKN8 822 aa21.33■■□□□ 1.01
CHD4-213ENST00000545584 NCANO14594 1321 aa21.32■■□□□ 1
CHD4-213ENST00000545584 PTPRJQ12913 1337 aa21.32■■□□□ 1
CHD4-213ENST00000545584 LMNAP02545 664 aaKnown RBP21.32■■□□□ 1
CHD4-213ENST00000545584 SLFN14P0C7P3 912 aa21.32■■□□□ 1
CHD4-213ENST00000545584 KPNA1P52294 538 aaPredicted RBP21.32■■□□□ 1
CHD4-213ENST00000545584 BMT2Q1RMZ1 405 aa21.32■■□□□ 1
CHD4-213ENST00000545584 SOWAHAQ2M3V2 549 aa21.32■■□□□ 1
CHD4-213ENST00000545584 ZNF528Q3MIS6 628 aa21.32■■□□□ 1
CHD4-213ENST00000545584 SCARA3Q6AZY7 606 aa21.32■■□□□ 1
CHD4-213ENST00000545584 OSTM1Q86WC4 334 aa21.32■■□□□ 1
CHD4-213ENST00000545584 ADSSL1Q8N142 457 aa21.32■■□□□ 1
CHD4-213ENST00000545584 BPIFB1Q8TDL5 484 aa21.32■■□□□ 1
CHD4-213ENST00000545584 CCDC127Q96BQ5 260 aa21.32■■□□□ 1
CHD4-213ENST00000545584 C8orf33Q9H7E9 229 aaPredicted RBP21.32■■□□□ 1
CHD4-213ENST00000545584 UXTQ9UBK9 157 aaPredicted RBP21.32■■□□□ 1
CHD4-213ENST00000545584 SERTAD1Q9UHV2 236 aa21.32■■□□□ 1
CHD4-213ENST00000545584 MAGED2Q9UNF1 606 aaPredicted RBP21.32■■□□□ 1
CHD4-213ENST00000545584 F5P12259 2224 aa21.32■■□□□ 1
CHD4-213ENST00000545584 TICRRQ7Z2Z1 1910 aa21.31■■□□□ 1
CHD4-213ENST00000545584 ARNTLO00327 626 aa21.31■■□□□ 1
CHD4-213ENST00000545584 GABRDO14764 452 aa21.31■■□□□ 1
CHD4-213ENST00000545584 CYP2F1P24903 491 aa21.31■■□□□ 1
CHD4-213ENST00000545584 DDX6P26196 483 aaKnown RBP eCLIP21.31■■□□□ 1
CHD4-213ENST00000545584 PLCB2Q00722 1185 aa21.31■■□□□ 1
CHD4-213ENST00000545584 CSTF1Q05048 431 aaKnown RBP21.31■■□□□ 1
CHD4-213ENST00000545584 CYP24A1Q07973 514 aa21.31■■□□□ 1
CHD4-213ENST00000545584 PSMD6Q15008 389 aa21.31■■□□□ 1
CHD4-213ENST00000545584 KNOP1Q1ED39 458 aaKnown RBP21.31■■□□□ 1
CHD4-213ENST00000545584 C4orf50Q6ZRC1 276 aa21.31■■□□□ 1
CHD4-213ENST00000545584 TRAPPC11Q7Z392 1133 aa21.31■■□□□ 1
CHD4-213ENST00000545584 MAML2Q8IZL2 1156 aaPredicted RBP21.31■■□□□ 1
CHD4-213ENST00000545584 GOLGA5Q8TBA6 731 aa21.31■■□□□ 1
CHD4-213ENST00000545584 MRPS31Q92665 395 aaKnown RBP21.31■■□□□ 1
CHD4-213ENST00000545584 FUBP3Q96I24 572 aaKnown RBP eCLIP21.31■■□□□ 1
CHD4-213ENST00000545584 MMS19Q96T76 1030 aa21.31■■□□□ 1
CHD4-213ENST00000545584 CGRRF1Q99675 332 aa21.31■■□□□ 1
CHD4-213ENST00000545584 IER2Q9BTL4 223 aa21.31■■□□□ 1
CHD4-213ENST00000545584 THG1LQ9NWX6 298 aaKnown RBP21.31■■□□□ 1
CHD4-213ENST00000545584 USP25Q9UHP3 1055 aa21.31■■□□□ 1
CHD4-213ENST00000545584 RIF1Q5UIP0 2472 aaKnown RBP21.31■■□□□ 1
CHD4-213ENST00000545584 NUP210Q8TEM1 1887 aaPredicted RBP21.3■■□□□ 1
CHD4-213ENST00000545584 FAM186AA6NE01 2351 aa21.3■■□□□ 1
CHD4-213ENST00000545584 SHISA7A6NL88 538 aa21.3■■□□□ 1
CHD4-213ENST00000545584 EXOC3O60645 756 aa21.3■■□□□ 1
CHD4-213ENST00000545584 HMGA1P17096 107 aaKnown RBP21.3■■□□□ 1
CHD4-213ENST00000545584 CCNE1P24864 410 aa21.3■■□□□ 1
CHD4-213ENST00000545584 AVPR1AP37288 418 aa21.3■■□□□ 1
CHD4-213ENST00000545584 GPR15P49685 360 aa21.3■■□□□ 1
CHD4-213ENST00000545584 NLRP12P59046 1061 aa21.3■■□□□ 1
CHD4-213ENST00000545584 KRT85P78386 507 aa21.3■■□□□ 1
CHD4-213ENST00000545584 DDR2Q16832 855 aa21.3■■□□□ 1
CHD4-213ENST00000545584 C12orf56Q8IXR9 622 aa21.3■■□□□ 1
CHD4-213ENST00000545584 CELF5Q8N6W0 485 aaKnown RBP21.3■■□□□ 1
CHD4-213ENST00000545584 SPATA32Q96LK8 384 aa21.3■■□□□ 1
CHD4-213ENST00000545584 SLC46A2Q9BY10 475 aa21.3■■□□□ 1
CHD4-213ENST00000545584 LMAN1LQ9HAT1 526 aa21.3■■□□□ 1
CHD4-213ENST00000545584 EXOC1Q9NV70 894 aa21.3■■□□□ 1
CHD4-213ENST00000545584 CDH9Q9ULB4 789 aa21.3■■□□□ 1
CHD4-213ENST00000545584 SLC38A8A6NNN8 435 aa21.29■■□□□ 1
CHD4-213ENST00000545584 SOBPA7XYQ1 873 aa21.29■■□□□ 1
CHD4-213ENST00000545584 KINO60870 393 aaKnown RBP21.29■■□□□ 1
CHD4-213ENST00000545584 PRAMEF12O95522 483 aa21.29■■□□□ 1
CHD4-213ENST00000545584 F11P03951 625 aa21.29■■□□□ 1
CHD4-213ENST00000545584 CMA1P23946 247 aa21.29■■□□□ 1
CHD4-213ENST00000545584 FZD5Q13467 585 aa21.29■■□□□ 1
CHD4-213ENST00000545584 TRPC3Q13507 836 aa21.29■■□□□ 1
CHD4-213ENST00000545584 PPP2R5DQ14738 602 aa21.29■■□□□ 1
CHD4-213ENST00000545584 MAPRE1Q15691 268 aaKnown RBP21.29■■□□□ 1
CHD4-213ENST00000545584 CFAP221Q4G0U5 840 aa21.29■■□□□ 1
CHD4-213ENST00000545584 SDHAF4Q5VUM1 108 aa21.29■■□□□ 1
CHD4-213ENST00000545584 SCN4BQ8IWT1 228 aa21.29■■□□□ 1
CHD4-213ENST00000545584 GRAMD1CQ8IYS0 662 aa21.29■■□□□ 1
CHD4-213ENST00000545584 CMTM8Q8IZV2 173 aa21.29■■□□□ 1
CHD4-213ENST00000545584 MAB21L3Q8N8X9 362 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms