RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 ANKRD40Q6AI12 368 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 MTSS1LQ765P7 747 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 ST13P5Q8NFI4 369 aaPredicted RBP12.23□□□□□ -0.45
YBX3-216ENST00000544622 SHKBP1Q8TBC3 707 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 ING5Q8WYH8 240 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 MCRS1Q96EZ8 462 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 SEPT5Q99719 369 aaPredicted RBP12.23□□□□□ -0.45
YBX3-216ENST00000544622 LPIN3Q9BQK8 851 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 MRPL45Q9BRJ2 306 aaKnown RBP12.23□□□□□ -0.45
YBX3-216ENST00000544622 GPR88Q9GZN0 384 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 TRPV4Q9HBA0 871 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 ZNF334Q9HCZ1 680 aaPredicted RBP12.23□□□□□ -0.45
YBX3-216ENST00000544622 CRTAC1Q9NQ79 661 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 ASAH2Q9NR71 780 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 SLC2A4RGQ9NR83 387 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 MAN1B1Q9UKM7 699 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 CDH9Q9ULB4 789 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 ZDBF2Q9HCK1 2354 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 ZNF318Q5VUA4 2279 aa12.23□□□□□ -0.45
YBX3-216ENST00000544622 PPP1R3GB7ZBB8 358 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 KINO60870 393 aaKnown RBP12.22□□□□□ -0.45
YBX3-216ENST00000544622 ATP2C2O75185 946 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 ASS1P00966 412 aaKnown RBP12.22□□□□□ -0.45
YBX3-216ENST00000544622 PDGFBP01127 241 aaPredicted RBP12.22□□□□□ -0.45
YBX3-216ENST00000544622 GJA1P17302 382 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 NPR3P17342 541 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 CYP2F1P24903 491 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 WEE1P30291 646 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 GPC5P78333 572 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 LRRC63Q05C16 580 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 MORC3Q14149 939 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 SGSM1Q2NKQ1 1148 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 FAM78AQ5JUQ0 283 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 TANGO2Q6ICL3 276 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 FOXR2Q6PJQ5 311 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 TMEM150AQ86TG1 271 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 ITIH5Q86UX2 942 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 FAM186BQ8IYM0 893 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 FBXL6Q8N531 539 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 TAF4BQ92750 862 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 ELSPBP1Q96BH3 223 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 EEF2KMTQ96G04 330 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 DHTKD1Q96HY7 919 aaPredicted RBP12.22□□□□□ -0.45
YBX3-216ENST00000544622 MYRFLQ96LU7 910 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 ASB16Q96NS5 453 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 MMS19Q96T76 1030 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 PI4K2AQ9BTU6 479 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 PLA2G2FQ9BZM2 168 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 ABI2Q9NYB9 513 aaPredicted RBP12.22□□□□□ -0.45
YBX3-216ENST00000544622 RAPGEFL1Q9UHV5 662 aa12.22□□□□□ -0.45
YBX3-216ENST00000544622 A0A1W2PRU2 124 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 KRBA1A5PL33 1030 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 TRIM49BA6NDI0 452 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 CETN3O15182 167 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 PHACTR2O75167 634 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 LRRN2O75325 713 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 PDGFRBP09619 1106 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 MYL4P12829 197 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 CCNE1P24864 410 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 GTF2H1P32780 548 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 MAGEA11P43364 429 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 GPR15P49685 360 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 CDH8P55286 799 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 TNNC1P63316 161 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 FKBP3Q00688 224 aaKnown RBP12.21□□□□□ -0.45
YBX3-216ENST00000544622 BIRC3Q13489 604 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 TEAD2Q15562 447 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 MAPRE1Q15691 268 aaKnown RBP12.21□□□□□ -0.45
YBX3-216ENST00000544622 ZNF699Q32M78 642 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 MYCBPAPQ8TBZ2 947 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 GPR152Q8TDT2 470 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 SMARCD2Q92925 531 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 ELMO3Q96BJ8 720 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 PCED1BQ96HM7 432 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 CEP295NLQ96MC4 621 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 SYT15Q9BQS2 421 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 SDCBP2Q9H190 292 aa12.21□□□□□ -0.45
YBX3-216ENST00000544622 NXF1Q9UBU9 619 aaKnown RBP12.21□□□□□ -0.45
YBX3-216ENST00000544622 NCANO14594 1321 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 SLC16A3O15427 465 aaKnown RBP12.2□□□□□ -0.46
YBX3-216ENST00000544622 NOL4O94818 638 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 FGF19O95750 216 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 HLA-DRAP01903 254 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 F11P03951 625 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 CFHP08603 1231 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 TRIM49P0CI25 452 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 TRIM49CP0CI26 452 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 PTPN1P18031 435 aaKnown RBP12.2□□□□□ -0.46
YBX3-216ENST00000544622 GABRR2P28476 465 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 PPP1R2P41236 205 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 ASPAP45381 313 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 GCLMP48507 274 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 PSMC1P62191 440 aaKnown RBP12.2□□□□□ -0.46
YBX3-216ENST00000544622 DDR2Q16832 855 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 ZNF667Q5HYK9 610 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 STXBP5Q5T5C0 1151 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 IER5LQ5T953 404 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 KRT39Q6A163 491 aa12.2□□□□□ -0.46
YBX3-216ENST00000544622 ISM2Q6H9L7 571 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms