RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 CHRNA3P32297 505 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 CHKAP35790 457 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 CLCN3P51790 818 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 LAMTOR4Q0VGL1 99 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 STRN3Q13033 797 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 TRPM8Q7Z2W7 1104 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 ZNF668Q96K58 619 aaPredicted RBP15.84■□□□□ 0.13
CHFR-223ENST00000544268 TSC22D3Q99576 134 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 WNT8AQ9H1J5 351 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 ADAM7Q9H2U9 754 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 TUT1Q9H6E5 874 aaKnown RBP15.84■□□□□ 0.13
CHFR-223ENST00000544268 PCYOX1Q9UHG3 505 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 HTTP42858 3142 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 FAM187AA6NFU0 413 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 GAS2O43903 313 aaKnown RBP15.84■□□□□ 0.13
CHFR-223ENST00000544268 ADCY3O60266 1144 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 C22orf31O95567 290 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 ECEL1O95672 775 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 IGHA2P01877 340 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 SRGAP2CP0DJJ0 459 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 UNGP13051 313 aaPredicted RBP15.84■□□□□ 0.13
CHFR-223ENST00000544268 TCF4P15884 667 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 ABL2P42684 1182 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 PSMC4P43686 418 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 EFCAB12Q6NXP0 572 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 APLFQ8IW19 511 aaPredicted RBP15.84■□□□□ 0.13
CHFR-223ENST00000544268 EXOC8Q8IYI6 725 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 KCNN1Q92952 543 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 CAPNS2Q96L46 248 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 MTA2O94776 668 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 HLA-DRAP01903 254 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 CREB1P16220 341 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 LIG4P49917 911 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 DGKDQ16760 1214 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 DEFB115Q30KQ5 88 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 ZNF484Q5JVG2 852 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 DENND2CQ68D51 928 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 RHPN2Q8IUC4 686 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 OR5B17Q8NGF7 314 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 TLCD1Q96CP7 247 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 SELENOSQ9BQE4 189 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 C11orf70Q9BRQ4 267 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 TARS2Q9BW92 718 aaKnown RBP15.83■□□□□ 0.12
CHFR-223ENST00000544268 AAASQ9NRG9 546 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 SIP14410 1827 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 ACSL3O95573 720 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 ALDH1A1P00352 501 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 LACTBP83111 547 aaPredicted RBP15.83■□□□□ 0.12
CHFR-223ENST00000544268 MXD4Q14582 209 aaPredicted RBP15.83■□□□□ 0.12
CHFR-223ENST00000544268 TCEAL1Q15170 157 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 ANKRD20A2Q5SQ80 823 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 ANKRD20A1Q5TYW2 823 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 ANKRD20A3Q5VUR7 823 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 TLK2Q86UE8 772 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 MCOLN2Q8IZK6 566 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 RNF149Q8NC42 400 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 CCDC97Q96F63 343 aaPredicted RBP15.83■□□□□ 0.12
CHFR-223ENST00000544268 CTNNAL1Q9UBT7 734 aa15.83■□□□□ 0.12
CHFR-223ENST00000544268 PMM2O15305 246 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 CHN1P15882 459 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 MAGEA8P43361 318 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 CTCFP49711 727 aaPredicted RBP15.82■□□□□ 0.12
CHFR-223ENST00000544268 FCGRTP55899 365 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 KCNJ2P63252 427 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 CAP1Q01518 475 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 KRT17Q04695 432 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 IRF5Q13568 498 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 LONRF1Q17RB8 773 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 ATP13A4Q4VNC1 1196 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 FAM133BQ5BKY9 247 aaKnown RBP15.82■□□□□ 0.12
CHFR-223ENST00000544268 C15orf39Q6ZRI6 1047 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 TMC2Q8TDI7 906 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 ZFAND2BQ8WV99 257 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 TMEM134Q9H6X4 195 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 SAMD15Q9P1V8 674 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 GABRQQ9UN88 632 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 AGAP1Q9UPQ3 857 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 DNAH12Q6ZR08 3092 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 A6NJR5 290 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 PIK3CAP42336 1068 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 TAS2R40P59535 323 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 SGO2Q562F6 1265 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 FAM182AQ5T1J6 154 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 ARMC3Q5W041 872 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 TMEM270Q6UE05 265 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 OSBPL1AQ9BXW6 950 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 CCDC113Q9H0I3 377 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 C1orf112Q9NSG2 853 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 RASAL2Q9UJF2 1139 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 USTQ9Y2C2 406 aa15.82■□□□□ 0.12
CHFR-223ENST00000544268 BRCA2P51587 3418 aa15.81■□□□□ 0.12
CHFR-223ENST00000544268 RIPK2O43353 540 aa15.81■□□□□ 0.12
CHFR-223ENST00000544268 C4BPAP04003 597 aaKnown RBP15.81■□□□□ 0.12
CHFR-223ENST00000544268 GNAT1P11488 350 aa15.81■□□□□ 0.12
CHFR-223ENST00000544268 ATP2A2P16615 1042 aaKnown RBP15.81■□□□□ 0.12
CHFR-223ENST00000544268 GARTP22102 1010 aa15.81■□□□□ 0.12
CHFR-223ENST00000544268 TNFSF9P41273 254 aa15.81■□□□□ 0.12
CHFR-223ENST00000544268 ERICH1Q86X53 443 aa15.81■□□□□ 0.12
CHFR-223ENST00000544268 ACSF2Q96CM8 615 aaPredicted RBP15.81■□□□□ 0.12
CHFR-223ENST00000544268 NAF1Q96HR8 494 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms