RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 NCOA4Q13772 614 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 CWF19L1Q69YN2 538 aaKnown RBP20.45■□□□□ 0.86
SPPL3-208ENST00000543854 ASTLQ6HA08 431 aaPredicted RBP20.45■□□□□ 0.86
SPPL3-208ENST00000543854 ZSCAN18Q8TBC5 510 aaPredicted RBP20.45■□□□□ 0.86
SPPL3-208ENST00000543854 GIPC2Q8TF65 315 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 SMARCD2Q92925 531 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 SMARCE1Q969G3 411 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 PRRX2Q99811 253 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 GPR88Q9GZN0 384 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 XYLT2Q9H1B5 865 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 SNX25Q9H3E2 840 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 ZFP14Q9HCL3 533 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 GTF3C4Q9UKN8 822 aa20.45■□□□□ 0.86
SPPL3-208ENST00000543854 TACC1O75410 805 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 AKAP3O75969 853 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 CDC25CP30307 473 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 AVPR2P30518 371 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 ANP32AP39687 249 aaKnown RBP20.44■□□□□ 0.86
SPPL3-208ENST00000543854 CLCN5P51795 746 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 RPL10AP62906 217 aaKnown RBP20.44■□□□□ 0.86
SPPL3-208ENST00000543854 GPC5P78333 572 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 PFKPQ01813 784 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 MAPRE1Q15691 268 aaKnown RBP20.44■□□□□ 0.86
SPPL3-208ENST00000543854 CCDC142Q17RM4 750 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 EDRF1Q3B7T1 1238 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 CFAP221Q4G0U5 840 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 ZCWPW2Q504Y3 356 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 ARHGAP15Q53QZ3 475 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 ZNF658Q5TYW1 1059 aaPredicted RBP20.44■□□□□ 0.86
SPPL3-208ENST00000543854 POTEHQ6S545 545 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 C4orf50Q6ZRC1 276 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 INTS8Q75QN2 995 aaKnown RBP20.44■□□□□ 0.86
SPPL3-208ENST00000543854 FAM186BQ8IYM0 893 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 FUBP3Q96I24 572 aaKnown RBP eCLIP20.44■□□□□ 0.86
SPPL3-208ENST00000543854 MRPL45Q9BRJ2 306 aaKnown RBP20.44■□□□□ 0.86
SPPL3-208ENST00000543854 GTPBP4Q9BZE4 634 aaKnown RBP20.44■□□□□ 0.86
SPPL3-208ENST00000543854 ATXN3LQ9H3M9 355 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 VRTNQ9H8Y1 702 aa20.44■□□□□ 0.86
SPPL3-208ENST00000543854 NXF1Q9UBU9 619 aaKnown RBP20.44■□□□□ 0.86
SPPL3-208ENST00000543854 MYBPHLA2RUH7 354 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 KRBA1A5PL33 1030 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 C4BPAP04003 597 aaKnown RBP20.43■□□□□ 0.86
SPPL3-208ENST00000543854 KRT13P13646 458 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 LMO2P25791 158 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 PLA2G5P39877 138 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 VAMP7P51809 220 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 ZACNQ401N2 412 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 TANGO2Q6ICL3 276 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 GAREM2Q75VX8 874 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 MYLPFQ96A32 169 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 FAM122AQ96E09 287 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 ZSWIM3Q96MP5 696 aa20.43■□□□□ 0.86
SPPL3-208ENST00000543854 IKBKBO14920 756 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 ATP2C2O75185 946 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 FAM163BP0C2L3 166 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 NPR3P17342 541 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 CYP2F1P24903 491 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 PSMC2P35998 433 aaKnown RBP20.42■□□□□ 0.86
SPPL3-208ENST00000543854 GNL1P36915 607 aaPredicted RBP20.42■□□□□ 0.86
SPPL3-208ENST00000543854 PIK3CAP42336 1068 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 GPR15P49685 360 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 ADAM9Q13443 819 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 ZNF667Q5HYK9 610 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 IER5LQ5T953 404 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 FAM171BQ6P995 826 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 TMEM105Q8N8V8 129 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 OR6B3Q8NGW1 331 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 SPATA20Q8TB22 786 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 ERCC4Q92889 916 aaPredicted RBP20.42■□□□□ 0.86
SPPL3-208ENST00000543854 TSG101Q99816 390 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 TBC1D17Q9HA65 648 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 TRPV4Q9HBA0 871 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 CRTAC1Q9NQ79 661 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 CHMP5Q9NZZ3 219 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 PCDHA5Q9Y5H7 936 aa20.42■□□□□ 0.86
SPPL3-208ENST00000543854 NUP210Q8TEM1 1887 aaPredicted RBP20.41■□□□□ 0.86
SPPL3-208ENST00000543854 STK25O00506 426 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 PDGFRBP09619 1106 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 CSH1P0DML2 217 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 CSH2P0DML3 217 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 P4HA1P13674 534 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 AOC1P19801 751 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 PRCPP42785 496 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 NUBP1P53384 320 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 CYP27A1Q02318 531 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 ENPEPQ07075 957 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 GRM2Q14416 872 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 COBLL1Q53SF7 1204 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 STXBP5Q5T5C0 1151 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 GPR158Q5T848 1215 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 SCARA5Q6ZMJ2 495 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 SV2AQ7L0J3 742 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 ELOA2Q8IYF1 753 aaPredicted RBP20.41■□□□□ 0.86
SPPL3-208ENST00000543854 DEPDC1BQ8WUY9 529 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 E2F7Q96AV8 911 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 SHDQ96IW2 340 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 PLA2G2FQ9BZM2 168 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 SMYD3Q9H7B4 428 aa20.41■□□□□ 0.86
SPPL3-208ENST00000543854 MAGEC2Q9UBF1 373 aaPredicted RBP20.41■□□□□ 0.86
SPPL3-208ENST00000543854 VNN1O95497 513 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms