RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SLC47A2Q86VL8 602 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 ZNF677Q86XU0 584 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 GLYCTKQ8IVS8 523 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 GPR65Q8IYL9 337 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 TC2NQ8N9U0 490 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 SLC4A11Q8NBS3 891 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 CCDC112Q8NEF3 446 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 PDLIM2Q96JY6 352 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 TWNKQ96RR1 684 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDB1-223ENST00000543658 VN1R3Q9BXE9 311 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 LMAN2LQ9H0V9 348 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 DPEP3Q9H4B8 488 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 CHST7Q9NS84 486 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 FAM49BQ9NUQ9 324 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 MTRRQ9UBK8 725 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
DDB1-223ENST00000543658 BACE2Q9Y5Z0 518 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 PATJQ8NI35 1801 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 MYO9BQ13459 2157 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 M0QYV0 167 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 RNF225M0QZC1 329 aaPredicted RBP12.63□□□□□ -0.39
DDB1-223ENST00000543658 HCRTO43612 131 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 IPO7O95373 1038 aaKnown RBP12.63□□□□□ -0.39
DDB1-223ENST00000543658 CXCL14O95715 111 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 ADH1AP07327 375 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 CYP11B1P15538 503 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 TNFAIP3P21580 790 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 ADORA2BP29275 332 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 CLCN1P35523 988 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 PRKCIP41743 596 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 NDUFV1P49821 464 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 ZNF132P52740 706 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 MRPL58Q14197 206 aaKnown RBP12.63□□□□□ -0.39
DDB1-223ENST00000543658 ARID5BQ14865 1188 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 NFE2Q16621 373 aaPredicted RBP12.63□□□□□ -0.39
DDB1-223ENST00000543658 PTPROQ16827 1216 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 SLC39A12Q504Y0 691 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 TAF3Q5VWG9 929 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 SPATA2LQ8IUW3 424 aaPredicted RBP12.63□□□□□ -0.39
DDB1-223ENST00000543658 CRYBG2Q8N1P7 616 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 OR10T2Q8NGX3 314 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 LNX1Q8TBB1 728 aaPredicted RBP12.63□□□□□ -0.39
DDB1-223ENST00000543658 SPPL3Q8TCT6 385 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 EPS8L1Q8TE68 723 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 WHAMMQ8TF30 809 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 GDPD5Q8WTR4 605 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 PPP2R3CQ969Q6 453 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 BAG1Q99933 345 aaPredicted RBP12.63□□□□□ -0.39
DDB1-223ENST00000543658 HAUS4Q9H6D7 363 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 NGRNQ9NPE2 291 aaKnown RBP12.63□□□□□ -0.39
DDB1-223ENST00000543658 CDY1Q9Y6F8 540 aa12.63□□□□□ -0.39
DDB1-223ENST00000543658 TMEM265A0A087WTH1 108 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 GRM6O15303 877 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 EFEMP2O95967 443 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 OR4Q2P0C623 313 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 SKILP12757 684 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 HNRNPH3P31942 346 aaKnown RBP12.62□□□□□ -0.39
DDB1-223ENST00000543658 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
DDB1-223ENST00000543658 CDR2Q01850 454 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 PTPN14Q15678 1187 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 MEA1Q16626 185 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 GOLGA7BQ2TAP0 167 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 KIAA0319Q5VV43 1072 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 SPRED2Q7Z698 418 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 TMTC1Q8IUR5 882 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 MSANTD4Q8NCY6 345 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 MYCBPAPQ8TBZ2 947 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 C2orf15Q8WU43 125 aaKnown RBP12.62□□□□□ -0.39
DDB1-223ENST00000543658 ZNF606Q8WXB4 792 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 AUTS2Q8WXX7 1259 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 MYLPFQ96A32 169 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 CYFIP2Q96F07 1278 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 CCDC42Q96M95 316 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 PPP1R9BQ96SB3 815 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 TMEM209Q96SK2 561 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 AGPAT1Q99943 283 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 RTP3Q9BQQ7 232 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 ZCWPW1Q9H0M4 648 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 ABI2Q9NYB9 513 aaPredicted RBP12.62□□□□□ -0.39
DDB1-223ENST00000543658 FNIP2Q9P278 1114 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 GTF3C4Q9UKN8 822 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 PCDHB5Q9Y5E4 795 aa12.62□□□□□ -0.39
DDB1-223ENST00000543658 SSU72P8A0A1W2PR75 194 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 AKR1B10O60218 316 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 ATP2C2O75185 946 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 FAM200BP0CF97 657 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 CCDC130P13994 396 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 RPL17P18621 184 aaKnown RBP12.61□□□□□ -0.39
DDB1-223ENST00000543658 KLRC2P26717 231 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 ANXA13P27216 316 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 ELF1P32519 619 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 OR1D2P34982 312 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 BCAT1P54687 386 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 CDK17Q00537 523 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 CNGA2Q16280 664 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 PPP1R26Q5T8A7 1209 aaPredicted RBP12.61□□□□□ -0.39
DDB1-223ENST00000543658 ZNF697Q5TEC3 545 aa12.61□□□□□ -0.39
DDB1-223ENST00000543658 E4F1Q66K89 784 aaPredicted RBP12.61□□□□□ -0.39
DDB1-223ENST00000543658 ARHGAP17Q68EM7 881 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms