RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SHDQ96IW2 340 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CGRRF1Q99675 332 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GOLPH3LQ9H4A5 285 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TRPV5Q9NQA5 729 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 SIT1Q9Y3P8 196 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 NME7Q9Y5B8 376 aa14.08□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MYBPHLA2RUH7 354 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 HEPACAM2A8MVW5 462 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 STK25O00506 426 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MYL1P05976 194 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DLATP10515 647 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PSMC3P17980 439 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 LMO2P25791 158 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GABRR2P28476 465 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 SYKP43405 635 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 LHX1P48742 406 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CLDN10P78369 228 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TSPY1Q01534 308 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PSMD2Q13200 908 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ANGPT1Q15389 498 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 NFE2Q16621 373 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 SLC9A9Q8IVB4 645 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ADGRF2Q8IZF7 708 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GIPC2Q8TF65 315 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DNASE1L2Q92874 299 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TRMT61BQ9BVS5 477 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 OSBPL6Q9BZF3 934 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 SCAND2PQ9GZW5 306 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 XYLT2Q9H1B5 865 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ATXN3LQ9H3M9 355 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ABCB6Q9NP58 842 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 HEBP1Q9NRV9 189 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ABI2Q9NYB9 513 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GTF3C4Q9UKN8 822 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PCDHB5Q9Y5E4 795 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MIA3Q5JRA6 1907 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DMXL1Q9Y485 3027 aa14.07□□□□□ -0.16
TNFRSF1A-215ENST00000543359 NUP210Q8TEM1 1887 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ATP2C2O75185 946 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FGF19O95750 216 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 F11P03951 625 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 RPN1P04843 607 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CD72P21854 359 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CYP2F1P24903 491 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GDI1P31150 447 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CASP4P49662 377 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GPR15P49685 360 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MYL7Q01449 175 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FCHO2Q0JRZ9 810 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DPYDQ12882 1025 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MYO1EQ12965 1108 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GPIHBP1Q8IV16 184 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ARID3BQ8IVW6 561 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MAML2Q8IZL2 1156 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FSIP1Q8NA03 581 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GOLGA5Q8TBA6 731 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PARD3BQ8TEW8 1205 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CLDN23Q96B33 292 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PI4K2AQ9BTU6 479 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 SLC46A2Q9BY10 475 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GDPD2Q9HCC8 539 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 LTB4R2Q9NPC1 389 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CRTAC1Q9NQ79 661 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 OBSL1O75147 1896 aa14.06□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TICRRQ7Z2Z1 1910 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GPR179Q6PRD1 2367 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PDXKO00764 312 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PRPF40AO75400 957 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 STAU1O95793 577 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TNNI1P19237 187 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 WARSP23381 471 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TARSP26639 723 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 CFAP221Q4G0U5 840 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GPR158Q5T848 1215 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 SDHAF4Q5VUM1 108 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 KRBA2Q6ZNG9 492 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 STKLD1Q8NE28 680 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FAM200AQ8TCP9 573 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 DEPDC1BQ8WUY9 529 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 IRF7Q92985 503 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 E2F7Q96AV8 911 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MYRFLQ96LU7 910 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FNBP1Q96RU3 617 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 MRPL45Q9BRJ2 306 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TASP1Q9H6P5 420 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 BRD9Q9H8M2 597 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 EXOC1Q9NV70 894 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ATP6V1DQ9Y5K8 247 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 PTPRDP23468 1912 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 GREB1Q4ZG55 1949 aa14.05□□□□□ -0.16
TNFRSF1A-215ENST00000543359 OTOGLQ3ZCN5 2332 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 FAM170BA6NMN3 283 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 EXOC3O60645 756 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TACC1O75410 805 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 TADA3O75528 432 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 NOL4O94818 638 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 RHOBTB3O94955 611 aa14.04□□□□□ -0.16
TNFRSF1A-215ENST00000543359 ZNF202O95125 648 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms