RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 R4GN57 208 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 HELZP42694 1942 aaKnown RBP16.8■□□□□ 0.28
VPS33A-206ENST00000542310 OTOGLQ3ZCN5 2332 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 ANAPC1Q9H1A4 1944 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 DPYSL4O14531 572 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 GABRDO14764 452 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
VPS33A-206ENST00000542310 TNNC2P02585 160 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 KRT19P08727 400 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 CSH1P0DML2 217 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 CSH2P0DML3 217 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 HOXD13P35453 343 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 BMT2Q1RMZ1 405 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 RESP18Q5W5W9 173 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 LIMS2Q7Z4I7 341 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 CBWD2Q8IUF1 395 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 NOC3LQ8WTT2 800 aaKnown RBP16.79■□□□□ 0.28
VPS33A-206ENST00000542310 NELL1Q92832 810 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 FUBP3Q96I24 572 aaKnown RBP eCLIP16.79■□□□□ 0.28
VPS33A-206ENST00000542310 PKMYT1Q99640 499 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 FAM126AQ9BYI3 521 aaPredicted RBP16.79■□□□□ 0.28
VPS33A-206ENST00000542310 AGPAT3Q9NRZ7 376 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 CGNQ9P2M7 1197 aaKnown RBP16.79■□□□□ 0.28
VPS33A-206ENST00000542310 UXTQ9UBK9 157 aaPredicted RBP16.79■□□□□ 0.28
VPS33A-206ENST00000542310 SNX9Q9Y5X1 595 aa16.79■□□□□ 0.28
VPS33A-206ENST00000542310 PTPRJQ12913 1337 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 PVALEFA0A1B0GWK0 134 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 POLR2DO15514 142 aaKnown RBP16.78■□□□□ 0.28
VPS33A-206ENST00000542310 PRPF40AO75400 957 aaKnown RBP16.78■□□□□ 0.28
VPS33A-206ENST00000542310 PRAMEF12O95522 483 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 ME1P48163 572 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 RPL10AP62906 217 aaKnown RBP16.78■□□□□ 0.28
VPS33A-206ENST00000542310 CYP4F8P98187 520 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 DUOXA2Q1HG44 320 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 CFAP221Q4G0U5 840 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 HS2ST1Q7LGA3 356 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 C12orf56Q8IXR9 622 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 BPIFB1Q8TDL5 484 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 HPS3Q969F9 1004 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 TRMT2BQ96GJ1 504 aaKnown RBP16.78■□□□□ 0.28
VPS33A-206ENST00000542310 KIF9Q9HAQ2 790 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 TMLHEQ9NVH6 421 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 ZSCAN32Q9NX65 697 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 NDRG2Q9UN36 371 aaKnown RBP16.78■□□□□ 0.28
VPS33A-206ENST00000542310 PCDHA7Q9UN72 937 aa16.78■□□□□ 0.28
VPS33A-206ENST00000542310 MYBPHLA2RUH7 354 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 TGFB1I1O43294 461 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 NOL4O94818 638 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 HMGA1P17096 107 aaKnown RBP16.77■□□□□ 0.28
VPS33A-206ENST00000542310 NLRP12P59046 1061 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 LRRC32Q14392 662 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 PPP2R5DQ14738 602 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 SNRNP35Q16560 246 aaKnown RBP16.77■□□□□ 0.28
VPS33A-206ENST00000542310 RALGPS2Q86X27 583 aaPredicted RBP16.77■□□□□ 0.28
VPS33A-206ENST00000542310 CELF5Q8N6W0 485 aaKnown RBP16.77■□□□□ 0.28
VPS33A-206ENST00000542310 ZBTB44Q8NCP5 570 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 OR5B17Q8NGF7 314 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 GIPC2Q8TF65 315 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 SCFD1Q8WVM8 642 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 HPDLQ96IR7 371 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 CEP295NLQ96MC4 621 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 CGRRF1Q99675 332 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 PI4K2AQ9BTU6 479 aa16.77■□□□□ 0.28
VPS33A-206ENST00000542310 LILRB5O75023 590 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 F11P03951 625 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 CTHP32929 405 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 MAGEA11P43364 429 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 CCR3P51677 355 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 CSTF1Q05048 431 aaKnown RBP16.76■□□□□ 0.27
VPS33A-206ENST00000542310 MTAPQ13126 283 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 ZNF268Q14587 947 aaPredicted RBP16.76■□□□□ 0.27
VPS33A-206ENST00000542310 PSMD6Q15008 389 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 MAPRE1Q15691 268 aaKnown RBP16.76■□□□□ 0.27
VPS33A-206ENST00000542310 SOWAHAQ2M3V2 549 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 FOXD4L5Q5VV16 416 aaPredicted RBP16.76■□□□□ 0.27
VPS33A-206ENST00000542310 LMBRD2Q68DH5 695 aaPredicted RBP16.76■□□□□ 0.27
VPS33A-206ENST00000542310 C4orf50Q6ZRC1 276 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 TMEM150AQ86TG1 271 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 OSTM1Q86WC4 334 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 CMTM8Q8IZV2 173 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 XXYLT1Q8NBI6 393 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 FOXD4L4Q8WXT5 416 aaPredicted RBP16.76■□□□□ 0.27
VPS33A-206ENST00000542310 FAM84AQ96KN4 292 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 MYRFLQ96LU7 910 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 THG1LQ9NWX6 298 aaKnown RBP16.76■□□□□ 0.27
VPS33A-206ENST00000542310 CDH9Q9ULB4 789 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 ZNF292O60281 2723 aa16.76■□□□□ 0.27
VPS33A-206ENST00000542310 EP300Q09472 2414 aaPredicted RBP16.76■□□□□ 0.27
VPS33A-206ENST00000542310 SPECC1L-ADORA2AF8WAN1 911 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 CHRNB1P11230 501 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 WARSP23381 471 aaKnown RBP16.75■□□□□ 0.27
VPS33A-206ENST00000542310 ACAT1P24752 427 aaKnown RBP16.75■□□□□ 0.27
VPS33A-206ENST00000542310 CCNE1P24864 410 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 AVPR1AP37288 418 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 KPNA1P52294 538 aaPredicted RBP16.75■□□□□ 0.27
VPS33A-206ENST00000542310 CYP24A1Q07973 514 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 FAM171BQ6P995 826 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 TRAPPC11Q7Z392 1133 aa16.75■□□□□ 0.27
VPS33A-206ENST00000542310 SPATA2LQ8IUW3 424 aaPredicted RBP16.75■□□□□ 0.27
VPS33A-206ENST00000542310 CEP57L1Q8IYX8 460 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms