RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 STXBP5LQ9Y2K9 1186 aa9.96□□□□□ -0.82
DDX55-208ENST00000541259 SF3B1O75533 1304 aaKnown RBP eCLIP9.96□□□□□ -0.82
DDX55-208ENST00000541259 SYN3O14994 580 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 SOD2P04179 222 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 PLEKP08567 350 aaPredicted RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 CFHP08603 1231 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 FAM163BP0C2L3 166 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 DNAJB1P25685 340 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 SSTR3P32745 418 aaPredicted RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 LHX1P48742 406 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 PSMC1P62191 440 aaKnown RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 YWHAEP62258 255 aaKnown RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 ELAVL2Q12926 359 aaKnown RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 MRPL58Q14197 206 aaKnown RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 ASIC2Q16515 512 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 USP41Q3LFD5 358 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 HGSNATQ68CP4 663 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 PRSS55Q6UWB4 352 aaPredicted RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 RSPO2Q6UXX9 243 aaPredicted RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 DDX53Q86TM3 631 aaKnown RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 NOP9Q86U38 636 aaKnown RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 CNGA4Q8IV77 575 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 C12orf29Q8N999 325 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 OR10T2Q8NGX3 314 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 OLIG1Q8TAK6 271 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 SLC20A1Q8WUM9 679 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 AUTS2Q8WXX7 1259 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 TFAP2BQ92481 460 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 TMEM176AQ96HP8 235 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 HEXIM2Q96MH2 286 aaKnown RBP9.95□□□□□ -0.82
DDX55-208ENST00000541259 CHP1Q99653 195 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 TTPALQ9BTX7 342 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 HERC2P3Q9BVR0 1158 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 NT5C1AQ9BXI3 368 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 CHST7Q9NS84 486 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 MSRAQ9UJ68 235 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 DSEQ9UL01 958 aa9.95□□□□□ -0.82
DDX55-208ENST00000541259 ZNF638Q14966 1978 aaKnown RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 COL4A4P53420 1690 aaPredicted RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 MYBPHLA2RUH7 354 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 C5orf67F2Z3F1 127 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 C3orf80F5H4A9 247 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 C2CD2LO14523 706 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 GRM6O15303 877 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 OAZ2O95190 189 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 CSPG5O95196 566 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 OR4Q2P0C623 313 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 FERP16591 822 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 CHRNB2P17787 502 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 PTPN1P18031 435 aaKnown RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 RPL17P18621 184 aaKnown RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 BRD2P25440 801 aaKnown RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 HNRNPH3P31942 346 aaKnown RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 PPM1AP35813 382 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 ERVK-21P61565 698 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 PLCB3Q01970 1234 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 KRT17Q04695 432 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 YWHAHQ04917 246 aaPredicted RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 RAB30Q15771 203 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 TAF3Q5VWG9 929 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 ZNF571Q7Z3V5 609 aaPredicted RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 LRRTM3Q86VH5 581 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 LAPTM4BQ86VI4 370 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 UNC93AQ86WB7 457 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 TMEM139Q8IV31 216 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 VPS52Q8N1B4 723 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 CRYBG2Q8N1P7 616 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 THEM5Q8N1Q8 247 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 LNX1Q8TBB1 728 aaPredicted RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 SPPL3Q8TCT6 385 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 RIN2Q8WYP3 895 aaPredicted RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 DDX1Q92499 740 aaKnown RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 SYN2Q92777 582 aaPredicted RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 ZNF830Q96NB3 372 aaPredicted RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 PANX2Q96RD6 677 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 TGS1Q96RS0 853 aaKnown RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 SYT15Q9BQS2 421 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 PLVAPQ9BX97 442 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 NUCKS1Q9H1E3 243 aaKnown RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 HAUS4Q9H6D7 363 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 CRTAC1Q9NQ79 661 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 TMLHEQ9NVH6 421 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 ARHGAP20Q9P2F6 1191 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 PUF60Q9UHX1 559 aaKnown RBP9.94□□□□□ -0.82
DDX55-208ENST00000541259 GREB1Q4ZG55 1949 aa9.94□□□□□ -0.82
DDX55-208ENST00000541259 FAM170AA1A519 330 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 ARHGEF37A1IGU5 675 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 CARNS1A5YM72 827 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 EPOPA6NHQ4 379 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 GOLGA6L6A8MZA4 724 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 ADAM12O43184 909 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 THAP12O43422 761 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 TBC1D4O60343 1298 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 SERPING1P05155 500 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 RB1P06400 928 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 PTMAP06454 111 aaKnown RBP9.93□□□□□ -0.82
DDX55-208ENST00000541259 PAEPP09466 180 aa9.93□□□□□ -0.82
DDX55-208ENST00000541259 CD19P15391 556 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms