RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TICRRQ7Z2Z1 1910 aa14.02□□□□□ -0.16
LTBR-208ENST00000541005 MYO16Q9Y6X6 1858 aa14.02□□□□□ -0.16
LTBR-208ENST00000541005 TRIM49BA6NDI0 452 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 PPP1R3GB7ZBB8 358 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 HCRTO43612 131 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 MOSPD3O75425 235 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 TRIM49P0CI25 452 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 TRIM49CP0CI26 452 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 CEBPBP17676 345 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 CCR2P41597 374 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 MAGEA11P43364 429 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 MAPRE1Q15691 268 aaKnown RBP14.02□□□□□ -0.17
LTBR-208ENST00000541005 SGSM1Q2NKQ1 1148 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 ZNF667Q5HYK9 610 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 CYP4A22Q5TCH4 519 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 TTI2Q6NXR4 508 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 MTSS1LQ765P7 747 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 BMP8AQ7Z5Y6 402 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 ITIH5Q86UX2 942 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 ASIC4Q96FT7 647 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 CEP63Q96MT8 703 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 SEPT5Q99719 369 aaPredicted RBP14.02□□□□□ -0.17
LTBR-208ENST00000541005 LRFN3Q9BTN0 628 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 TMEM8AQ9HCN3 771 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 ABI2Q9NYB9 513 aaPredicted RBP14.02□□□□□ -0.17
LTBR-208ENST00000541005 KIAA1468Q9P260 1216 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 NME7Q9Y5B8 376 aa14.02□□□□□ -0.17
LTBR-208ENST00000541005 MYBPHLA2RUH7 354 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 FAM86C2PA6NEL3 165 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 TMEM221A6NGB7 291 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 M0R296 226 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 NRG2O14511 850 aaPredicted RBP14.01□□□□□ -0.17
LTBR-208ENST00000541005 STX10O60499 249 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 SOAT2O75908 522 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 FGF19O95750 216 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 HLA-DRAP01903 254 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 P4HA1P13674 534 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 LMO2P25791 158 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 GNL1P36915 607 aaPredicted RBP14.01□□□□□ -0.17
LTBR-208ENST00000541005 PIK3CAP42336 1068 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 GCLMP48507 274 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 VEPH1Q14D04 833 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 CCDC142Q17RM4 750 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 MGAT5BQ3V5L5 792 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 ISM2Q6H9L7 571 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 C4orf50Q6ZRC1 276 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 DNAJB7Q7Z6W7 309 aaPredicted RBP14.01□□□□□ -0.17
LTBR-208ENST00000541005 HS6ST3Q8IZP7 471 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 MYCBPAPQ8TBZ2 947 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 ING5Q8WYH8 240 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 TCEAL4Q96EI5 215 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 EEF2KMTQ96G04 330 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 LPIN3Q9BQK8 851 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 SNX25Q9H3E2 840 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 CLSTN2Q9H4D0 955 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 SMYD3Q9H7B4 428 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 CRTAC1Q9NQ79 661 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 NXF1Q9UBU9 619 aaKnown RBP14.01□□□□□ -0.17
LTBR-208ENST00000541005 GTF3C4Q9UKN8 822 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 NUMBLQ9Y6R0 609 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 CACNA1HO95180 2353 aa14.01□□□□□ -0.17
LTBR-208ENST00000541005 BICDL2A1A5D9 508 aa14□□□□□ -0.17
LTBR-208ENST00000541005 BIN1O00499 593 aa14□□□□□ -0.17
LTBR-208ENST00000541005 ATP2C2O75185 946 aa14□□□□□ -0.17
LTBR-208ENST00000541005 ASPAP45381 313 aa14□□□□□ -0.17
LTBR-208ENST00000541005 PSMC1P62191 440 aaKnown RBP14□□□□□ -0.17
LTBR-208ENST00000541005 RPL10AP62906 217 aaKnown RBP14□□□□□ -0.17
LTBR-208ENST00000541005 NOP14P78316 857 aaKnown RBP14□□□□□ -0.17
LTBR-208ENST00000541005 KRT39Q6A163 491 aa14□□□□□ -0.17
LTBR-208ENST00000541005 POTEHQ6S545 545 aa14□□□□□ -0.17
LTBR-208ENST00000541005 VSTM1Q6UX27 236 aa14□□□□□ -0.17
LTBR-208ENST00000541005 SLC44A3Q8N4M1 653 aa14□□□□□ -0.17
LTBR-208ENST00000541005 SHKBP1Q8TBC3 707 aa14□□□□□ -0.17
LTBR-208ENST00000541005 TAS1R2Q8TE23 839 aa14□□□□□ -0.17
LTBR-208ENST00000541005 NELFBQ8WX92 580 aa14□□□□□ -0.17
LTBR-208ENST00000541005 FGF14Q92915 247 aa14□□□□□ -0.17
LTBR-208ENST00000541005 MYLPFQ96A32 169 aa14□□□□□ -0.17
LTBR-208ENST00000541005 FAXDC2Q96IV6 333 aa14□□□□□ -0.17
LTBR-208ENST00000541005 CEP295NLQ96MC4 621 aa14□□□□□ -0.17
LTBR-208ENST00000541005 GBP4Q96PP9 640 aa14□□□□□ -0.17
LTBR-208ENST00000541005 DUSP9Q99956 384 aaKnown RBP14□□□□□ -0.17
LTBR-208ENST00000541005 PI4K2AQ9BTU6 479 aa14□□□□□ -0.17
LTBR-208ENST00000541005 BCO2Q9BYV7 579 aa14□□□□□ -0.17
LTBR-208ENST00000541005 SMOC2Q9H3U7 446 aa14□□□□□ -0.17
LTBR-208ENST00000541005 ZNF334Q9HCZ1 680 aaPredicted RBP14□□□□□ -0.17
LTBR-208ENST00000541005 LMBRD1Q9NUN5 540 aa14□□□□□ -0.17
LTBR-208ENST00000541005 ECI2O75521 394 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 SRFP11831 508 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 MYL4P12829 197 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 HMGA1P17096 107 aaKnown RBP13.99□□□□□ -0.17
LTBR-208ENST00000541005 CYP2F1P24903 491 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 MXI1P50539 228 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 INCA1Q0VD86 236 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 PAK1Q13153 545 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 CAMK4Q16566 473 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 KLHL10Q6JEL2 608 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 PARM1Q6UWI2 310 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 GAREM2Q75VX8 874 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 FRMD5Q7Z6J6 570 aa13.99□□□□□ -0.17
LTBR-208ENST00000541005 FILIP1Q7Z7B0 1213 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms