RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 GIPC2Q8TF65 315 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 TMEM174Q8WUU8 243 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 ZSWIM3Q96MP5 696 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 PI4K2AQ9BTU6 479 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 TRMT61BQ9BVS5 477 aaKnown RBP18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 PLA2G2FQ9BZM2 168 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 TRPV4Q9HBA0 871 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 ABCB6Q9NP58 842 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 TMLHEQ9NVH6 421 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 DMAC2Q9NW81 257 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 GTF3C4Q9UKN8 822 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 FRMD4BQ9Y2L6 1034 aa18.38■□□□□ 0.53
CACNA2D4-211ENST00000540728 CST3P01034 146 aaPredicted RBP18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 DCNP07585 359 aaKnown RBP18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 ATF6P18850 670 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 FCARP24071 287 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 ATICP31939 592 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 STARD6P59095 220 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 GRM2Q14416 872 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 MAPRE1Q15691 268 aaKnown RBP18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 POTEHQ6S545 545 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 C4orf50Q6ZRC1 276 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 SPATA2LQ8IUW3 424 aaPredicted RBP18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 PARD3BQ8TEW8 1205 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 DEPDC1BQ8WUY9 529 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 SYAP1Q96A49 352 aaPredicted RBP18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 SYT15Q9BQS2 421 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 SNX25Q9H3E2 840 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 BRD9Q9H8M2 597 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 ZNF334Q9HCZ1 680 aaPredicted RBP18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 CDH9Q9ULB4 789 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 SIT1Q9Y3P8 196 aa18.37■□□□□ 0.53
CACNA2D4-211ENST00000540728 NRG2O14511 850 aaPredicted RBP18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 DPYSL4O14531 572 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 FAM163BP0C2L3 166 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 CSH1P0DML2 217 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 CSH2P0DML3 217 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 PSMC3P17980 439 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 WARSP23381 471 aaKnown RBP18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 UBXN2BQ14CS0 331 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 WDR72Q3MJ13 1102 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 MIA3Q5JRA6 1907 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 GPR158Q5T848 1215 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 CEP135Q66GS9 1140 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 GAREM2Q75VX8 874 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 LIMS2Q7Z4I7 341 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 FRMD5Q7Z6J6 570 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 YAF2Q8IY57 180 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 GUF1Q8N442 669 aaKnown RBP18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 PJA1Q8NG27 643 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 ZNF516Q92618 1163 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 DNASE1L2Q92874 299 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 IRF7Q92985 503 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 FUBP3Q96I24 572 aaKnown RBP eCLIP18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 ZMYM5Q9UJ78 669 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 TRAF3IP3Q9Y228 551 aa18.36■□□□□ 0.53
CACNA2D4-211ENST00000540728 TACC1O75410 805 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 STAU1O95793 577 aaKnown RBP18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 PDGFRBP09619 1106 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 CYP2F1P24903 491 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 RPL13P26373 211 aaKnown RBP18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 GNL1P36915 607 aaPredicted RBP18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 VIPR2P41587 438 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 CASP4P49662 377 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 MYL6P60660 151 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 CFAP221Q4G0U5 840 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 TPRG1Q6ZUI0 275 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 MFSD6LQ8IWD5 586 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 OR6B3Q8NGW1 331 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 KBTBD7Q8WVZ9 684 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 PKMYT1Q99640 499 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 TASP1Q9H6P5 420 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 RMND1Q9NWS8 449 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 MAGEC2Q9UBF1 373 aaPredicted RBP18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 HOOK1Q9UJC3 728 aaKnown RBP18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 MAPK8IP1Q9UQF2 711 aa18.35■□□□□ 0.53
CACNA2D4-211ENST00000540728 KANSL1LA0AUZ9 987 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 MYBPHLA2RUH7 354 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 LRRIQ3A6PVS8 624 aaPredicted RBP18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 HEPACAM2A8MVW5 462 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 ZNF263O14978 683 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 LMO2P25791 158 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 GDI1P31150 447 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 CLDN10P78369 228 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 FAM171BQ6P995 826 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 VITQ6UXI7 678 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 ARID3BQ8IVW6 561 aaPredicted RBP18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 SCN4BQ8IWT1 228 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 FMR1NBQ8N0W7 255 aaPredicted RBP18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 TMC2Q8TDI7 906 aa18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 GZF1Q9H116 711 aaPredicted RBP18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 UXTQ9UBK9 157 aaPredicted RBP18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 NXF1Q9UBU9 619 aaKnown RBP18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 MAGED2Q9UNF1 606 aaPredicted RBP18.34■□□□□ 0.53
CACNA2D4-211ENST00000540728 MAPK13O15264 365 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 HCRTO43612 131 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 LRRN2O75325 713 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 SMC2O95347 1197 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 NR2F2P24468 414 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 NBL1P41271 181 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms