RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 SPATA2LQ8IUW3 424 aaPredicted RBP13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 WDR49Q8IV35 697 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TOP6BLQ8N6T0 577 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 XXYLT1Q8NBI6 393 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TTC8Q8TAM2 541 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CSGALNACT1Q8TDX6 532 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 LEO1Q8WVC0 666 aaPredicted RBP13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 E2F7Q96AV8 911 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PAGE5Q96GU1 130 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MMS19Q96T76 1030 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ACBD6Q9BR61 282 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MKNK1Q9BUB5 465 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SMG9Q9H0W8 520 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 IL21Q9HBE4 155 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MRPS17Q9Y2R5 130 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ZDHHC9Q9Y397 364 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PIAS3Q9Y6X2 628 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TICRRQ7Z2Z1 1910 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 NCAM2O15394 837 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 LAMTOR5O43504 91 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ATP2C2O75185 946 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PRAMEF12O95522 483 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SLFN14P0C7P3 912 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PCSK1P29120 753 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 LHX1P48742 406 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PSMC1P62191 440 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 KRT85P78386 507 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 KNOP1Q1ED39 458 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TRAPPC11Q7Z392 1133 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SCN4BQ8IWT1 228 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 FAM3CQ92520 227 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ZFYVE19Q96K21 471 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 NELL2Q99435 816 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CGRRF1Q99675 332 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 OSBPL6Q9BZF3 934 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TASP1Q9H6P5 420 aa13.67□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MYBPHLA2RUH7 354 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SHISA7A6NL88 538 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SLC38A8A6NNN8 435 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 KLRC4O43908 158 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 EXOC3O60645 756 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PDGFRBP09619 1106 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CMA1P23946 247 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CCNE1P24864 410 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 LMO2P25791 158 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SOX9P48436 509 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 KPNA1P52294 538 aaPredicted RBP13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 RPL10AP62906 217 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CSTF1Q05048 431 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PSMD6Q15008 389 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 BMT2Q1RMZ1 405 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 KMT5BQ4FZB7 885 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MAB21L3Q8N8X9 362 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 KBTBD7Q8WVZ9 684 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 LRRC3BQ96PB8 259 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PKMYT1Q99640 499 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SYT15Q9BQS2 421 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SLC46A2Q9BY10 475 aa13.66□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 COL4A2P08572 1712 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 GABRDO14764 452 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CHADO15335 359 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PHACTR2O75167 634 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CST3P01034 146 aaPredicted RBP13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CSH1P0DML2 217 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CSH2P0DML3 217 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 HMGA1P17096 107 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MAGEA9P43362 315 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CASP4P49662 377 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 NLRP12P59046 1061 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SNRPFP62306 86 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 FCHO2Q0JRZ9 810 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 STK4Q13043 487 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TRPC3Q13507 836 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TXNDC8Q6A555 127 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ZC3H14Q6PJT7 736 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TMEM150AQ86TG1 271 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MAML2Q8IZL2 1156 aaPredicted RBP13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ADSSL1Q8N142 457 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 KIAA0895Q8NCT3 520 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TTC16Q8NEE8 873 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SPATA18Q8TC71 538 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 BPIFB1Q8TDL5 484 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ZNF516Q92618 1163 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MYLPFQ96A32 169 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CLDN23Q96B33 292 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MRPL45Q9BRJ2 306 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SNX25Q9H3E2 840 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TRPC7Q9HCX4 862 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ABCB6Q9NP58 842 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TRPV5Q9NQA5 729 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CGNQ9P2M7 1197 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PIEZO1Q92508 2521 aa13.65□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 NUP210Q8TEM1 1887 aaPredicted RBP13.64□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 ARNTLO00327 626 aa13.64□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 F11P03951 625 aa13.64□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 AVPR1AP37288 418 aa13.64□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 SYKP43405 635 aa13.64□□□□□ -0.23
TSPAN9-IT1-201ENST00000539784 RPS9P46781 194 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms