RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CRYBG2Q8N1P7 616 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 B3GALNT2Q8NCR0 500 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 OR10T2Q8NGX3 314 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 PPP2R3CQ969Q6 453 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 HEXIM2Q96MH2 286 aaKnown RBP16.42■□□□□ 0.22
DDB1-216ENST00000539739 CLSTN3Q9BQT9 956 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 ELOVL4Q9GZR5 314 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 ZCWPW1Q9H0M4 648 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 NUCKS1Q9H1E3 243 aaKnown RBP16.42■□□□□ 0.22
DDB1-216ENST00000539739 PRDM12Q9H4Q4 367 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 LMCD1Q9NZU5 365 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 HMGXB4Q9UGU5 601 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 CHD9Q3L8U1 2897 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 TEX28O15482 410 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 HCRTO43612 131 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 ZNF500O60304 480 aaPredicted RBP16.41■□□□□ 0.22
DDB1-216ENST00000539739 GYPCP04921 128 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 CNPP09543 421 aaKnown RBP16.41■□□□□ 0.22
DDB1-216ENST00000539739 CCDC172P0C7W6 258 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 KLRC2P26717 231 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 CASP14P31944 242 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 SOX5P35711 763 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 RAD23BP54727 409 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 PSMC1P62191 440 aaKnown RBP16.41■□□□□ 0.22
DDB1-216ENST00000539739 ZBED6P86452 979 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 GRIN2CQ14957 1233 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 GLYCTKQ8IVS8 523 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 FAM71AQ8IYT1 594 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 SLC4A11Q8NBS3 891 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 KLHL5Q96PQ7 755 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 TWNKQ96RR1 684 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 TMEM209Q96SK2 561 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 GPR88Q9GZN0 384 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 DPEP3Q9H4B8 488 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 GTF3C4Q9UKN8 822 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 KIAA1257Q9ULG3 409 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 NME7Q9Y5B8 376 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 HIDE1A8MVS5 230 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 GOLGA6L6A8MZA4 724 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 PTK2Q05397 1052 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 ORC1Q13415 861 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 NFE2Q16621 373 aaPredicted RBP16.41■□□□□ 0.22
DDB1-216ENST00000539739 SLC39A12Q504Y0 691 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 RSPO2Q6UXX9 243 aaPredicted RBP16.41■□□□□ 0.22
DDB1-216ENST00000539739 BAP1Q92560 729 aa16.41■□□□□ 0.22
DDB1-216ENST00000539739 TSC2P49815 1807 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 MYBPHLA2RUH7 354 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 LRRC53A6NM62 1247 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 RNF225M0QZC1 329 aaPredicted RBP16.4■□□□□ 0.22
DDB1-216ENST00000539739 CYP26A1O43174 497 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 ATP2C2O75185 946 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 GFPT2O94808 682 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 OR4Q2P0C623 313 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 PNMA6AP0CW24 399 aaPredicted RBP16.4■□□□□ 0.22
DDB1-216ENST00000539739 VDRP11473 427 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 CD19P15391 556 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 KRT9P35527 623 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 ZNF132P52740 706 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 ROR1Q01973 937 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 GPR17Q13304 367 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 RAB33AQ14088 237 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 TSR1Q2NL82 804 aaKnown RBP16.4■□□□□ 0.22
DDB1-216ENST00000539739 SGO2Q562F6 1265 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 MDH1BQ5I0G3 518 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 SFMBT2Q5VUG0 894 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 FAM171BQ6P995 826 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 C4orf50Q6ZRC1 276 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 MYCBPAPQ8TBZ2 947 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 GAS2L1Q99501 681 aaPredicted RBP16.4■□□□□ 0.22
DDB1-216ENST00000539739 CRTAC1Q9NQ79 661 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 PCDHGC5Q9Y5F6 944 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 CHD7Q9P2D1 2997 aa16.4■□□□□ 0.22
DDB1-216ENST00000539739 ADAM12O43184 909 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 FERP16591 822 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 GNA15P30679 374 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 FXR1P51114 621 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■■□□ 18.6
DDB1-216ENST00000539739 TPGS2Q68CL5 300 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 LRRTM3Q86VH5 581 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 SPATA2LQ8IUW3 424 aaPredicted RBP16.39■□□□□ 0.21
DDB1-216ENST00000539739 CNGA4Q8IV77 575 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 ZNF461Q8TAF7 563 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 C2orf15Q8WU43 125 aaKnown RBP16.39■□□□□ 0.21
DDB1-216ENST00000539739 SECISBP2LQ93073 1101 aaKnown RBP16.39■□□□□ 0.21
DDB1-216ENST00000539739 FAM161BQ96MY7 647 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 MED10Q9BTT4 135 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 TLE6Q9H808 572 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 YY1AP1Q9H869 796 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 IMPACTQ9P2X3 320 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 PCDHB5Q9Y5E4 795 aa16.39■□□□□ 0.21
DDB1-216ENST00000539739 ATP8B3O60423 1300 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 WDR27A2RRH5 827 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 AKR1B15C9JRZ8 316 aaPredicted RBP16.38■□□□□ 0.21
DDB1-216ENST00000539739 MED7O43513 233 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 C1RP00736 705 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 ELF1P32519 619 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 PDE6CP51160 858 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 CYP27A1Q02318 531 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 ARID5AQ03989 594 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 TBX2Q13207 712 aaPredicted RBP16.38■□□□□ 0.21
DDB1-216ENST00000539739 STILQ15468 1287 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms