RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PPIL6Q8IXY8 311 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDH13-204ENST00000539548 NIPA2Q8N8Q9 360 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 MZB1Q8WU39 189 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 ALKBH8Q96BT7 664 aaKnown RBP10.17□□□□□ -0.78
CDH13-204ENST00000539548 CGRRF1Q99675 332 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 FRMD8P1Q9BZ68 369 aaPredicted RBP10.17□□□□□ -0.78
CDH13-204ENST00000539548 HAPLN2Q9GZV7 340 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 DENND2DQ9H6A0 471 aaPredicted RBP10.17□□□□□ -0.78
CDH13-204ENST00000539548 DCLRE1BQ9H816 532 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 EFR3BQ9Y2G0 817 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 CLUHO75153 1309 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 E7ESA3 106 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 SKAP2O75563 359 aaPredicted RBP10.16□□□□□ -0.78
CDH13-204ENST00000539548 SIP14410 1827 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 TSHRP16473 764 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 ADRA1DP25100 572 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 CDC25CP30307 473 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 GCKP35557 465 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 ARL4CP56559 192 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 PLCB3Q01970 1234 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 OGDHQ02218 1023 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 KLHL38Q2WGJ6 581 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 PLEKHG4Q58EX7 1191 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 PPP1R15BQ5SWA1 713 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 TXNRD3NBQ6F5E7 133 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 DNAJC24Q6P3W2 148 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 ANKMY2Q8IV38 441 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 BANPQ8N9N5 519 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 ATP11CQ8NB49 1132 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 ARMC2Q8NEN0 867 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 PYROXD1Q8WU10 500 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 MRRFQ96E11 262 aaKnown RBP10.16□□□□□ -0.78
CDH13-204ENST00000539548 TMEM121Q9BTD3 319 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 ZNF518BQ9C0D4 1074 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 ACSS3Q9H6R3 686 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 NPHS2Q9NP85 383 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 RBAKQ9NYW8 714 aaPredicted RBP10.16□□□□□ -0.78
CDH13-204ENST00000539548 ZFATQ9P243 1243 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 KANSL3Q9P2N6 904 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 CNTNAP2Q9UHC6 1331 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 ABLIM1O14639 778 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 NR3C2P08235 984 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 KCNA2P16389 499 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 GLRA2P23416 452 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 IRX1P78414 480 aaPredicted RBP10.16□□□□□ -0.78
CDH13-204ENST00000539548 EN1Q05925 392 aaPredicted RBP10.16□□□□□ -0.78
CDH13-204ENST00000539548 TFDP1Q14186 410 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 SEPT7Q16181 437 aaKnown RBP10.16□□□□□ -0.78
CDH13-204ENST00000539548 FNBP1LQ5T0N5 605 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 ANO7Q6IWH7 933 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 DCUN1D2Q6PH85 259 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 C4orf50Q6ZRC1 276 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 POLNQ7Z5Q5 900 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 NAT8LQ8N9F0 302 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 MTMR14Q8NCE2 650 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 TTC8Q8TAM2 541 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 CPT1BQ92523 772 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 MCEEQ96PE7 176 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 FAM167BQ9BTA0 163 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 MANSC1Q9H8J5 431 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 SEPT9Q9UHD8 586 aaPredicted RBP10.16□□□□□ -0.78
CDH13-204ENST00000539548 ZNRF3Q9ULT6 936 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 CTDP1Q9Y5B0 961 aaPredicted RBP10.16□□□□□ -0.78
CDH13-204ENST00000539548 DOCK5Q9H7D0 1870 aa10.16□□□□□ -0.78
CDH13-204ENST00000539548 A0A0B4J269 797 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 LRRD1A4D1F6 860 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 C3orf70A6NLC5 250 aaPredicted RBP10.15□□□□□ -0.78
CDH13-204ENST00000539548 SMAPO00193 183 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 PPP1R12AO14974 1030 aaPredicted RBP10.15□□□□□ -0.78
CDH13-204ENST00000539548 CCDC22O60826 627 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 BANF1O75531 89 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 IFNB1P01574 187 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 CHRNA5P30532 468 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 SSTR1P30872 391 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 PTDSS1P48651 473 aaKnown RBP10.15□□□□□ -0.78
CDH13-204ENST00000539548 CTCFP49711 727 aaPredicted RBP10.15□□□□□ -0.78
CDH13-204ENST00000539548 PRKCEQ02156 737 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 NCOA4Q13772 614 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 BAATQ14032 418 aaPredicted RBP10.15□□□□□ -0.78
CDH13-204ENST00000539548 MSS51Q4VC12 460 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 XKR3Q5GH77 459 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 CIAPIN1Q6FI81 312 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 ABHD15Q6UXT9 468 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 C3orf62Q6ZUJ4 267 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 LMNTD2Q8IXW0 634 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 TTC13Q8NBP0 860 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 TMEM35BQ8NCS4 154 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 OR5B17Q8NGF7 314 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 TCP10LQ8TDR4 215 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 DCAKDQ8WVC6 231 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 HAUS1Q96CS2 278 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 PTCD3Q96EY7 689 aaKnown RBP10.15□□□□□ -0.78
CDH13-204ENST00000539548 ZBTB45Q96K62 511 aaPredicted RBP10.15□□□□□ -0.78
CDH13-204ENST00000539548 PAFAH2Q99487 392 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 BTBD10Q9BSF8 475 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 OSBPL1AQ9BXW6 950 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 CADM1Q9BY67 442 aaKnown RBP10.15□□□□□ -0.78
CDH13-204ENST00000539548 TRIM55Q9BYV6 548 aa10.15□□□□□ -0.78
CDH13-204ENST00000539548 NUMBLQ9Y6R0 609 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms