RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CLDN16Q9Y5I7 305 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MYBBP1AQ9BQG0 1328 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TMEM200CA6NKL6 621 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CDRT15L2A8MXV6 281 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 GCOM1H8Y6P7 765 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 AGPSO00116 658 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ACKR2O00590 384 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 DVL1O14640 695 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 HNRNPRO43390 633 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TOX4O94842 621 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 FOSP01100 380 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ANXA2P07355 339 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 PDHA1P08559 390 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ALADP13716 330 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ALOX15P16050 662 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 KRT4P19013 534 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TBXAS1P24557 533 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CST5P28325 142 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 PRDX5P30044 214 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 IL13P35225 146 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CASRP41180 1078 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TIAL1Q01085 375 aaKnown RBP eCLIP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 HGFACQ04756 655 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CTBP1Q13363 440 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 KCNAB1Q14722 419 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 GLE1Q53GS7 698 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CRB2Q5IJ48 1285 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 AFMIDQ63HM1 303 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CYP26C1Q6V0L0 522 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 USP49Q70CQ1 688 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 USP30Q70CQ3 517 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TRMT2AQ8IZ69 625 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 NAXEQ8NCW5 288 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SIMC1Q8NDZ2 872 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 FLCNQ8NFG4 579 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MYRIPQ8NFW9 859 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SMCR8Q8TEV9 937 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TBC1D22AQ8WUA7 517 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ADAMTS14Q8WXS8 1223 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 C7orf26Q96N11 449 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 DIRC2Q96SL1 478 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CDC5LQ99459 802 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 NAP1L4Q99733 375 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MCOLN1Q9GZU1 580 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 OR10A2Q9H208 303 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TTYH1Q9H313 450 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SEPSECSQ9HD40 501 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 FSCN3Q9NQT6 498 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TMEM140Q9NV12 185 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ARHGAP28Q9P2N2 729 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 DKK4Q9UBT3 224 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 GABRQQ9UN88 632 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 RUSC2Q8N2Y8 1516 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 H3BNC9 293 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 IRAK2O43187 625 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TGM1P22735 817 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 KIR2DL3P43628 341 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 KCNQ1P51787 676 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ADCY7P51828 1080 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ZBED6P86452 979 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 PIGFQ07326 219 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 PUM1Q14671 1186 aaKnown RBP eCLIP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SLC5A9Q2M3M2 681 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 C1QL3Q5VWW1 255 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ANO1Q5XXA6 986 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 GRAMD4Q6IC98 578 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ZSWIM9Q86XI8 627 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MYLK4Q86YV6 388 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TP53INP2Q8IXH6 220 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 LGI4Q8N135 537 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MYCT1Q8N699 235 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 GLIS1Q8NBF1 620 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 NGDNQ8NEJ9 315 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 WDR48Q8TAF3 677 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 BRIX1Q8TDN6 353 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 IPO4Q8TEX9 1081 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 STYXQ8WUJ0 223 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MBD6Q96DN6 1003 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CCDC138Q96M89 665 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CDK5RAP1Q96SZ6 601 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TRIM5Q9C035 493 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SYNPO2LQ9H987 977 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 NDUFAF4Q9P032 175 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 HDAC5Q9UQL6 1122 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 RCE1Q9Y256 329 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 LOC100509620A0A075B734 347 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 A0A087WWL8 130 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TCRBV7S2A1N4TA0A589 114 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CFAP69A5D8W1 941 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 LGALS16A8MUM7 142 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 F5H423 210 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 HYAL3O43820 417 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 AKR1B10O60218 316 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 IL18RAPO95256 599 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 BAG2O95816 211 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 ATXN1LP0C7T5 689 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 IGFBP2P18065 325 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MALP21145 153 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 FDXRP22570 491 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 PRKAA2P54646 552 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms