RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 XRRA1Q6P2D8 792 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 PDCD7Q8N8D1 485 aaKnown RBP14.71□□□□□ -0.06
LIG1-203ENST00000536218 CEP70Q8NHQ1 597 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 SLC20A1Q8WUM9 679 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 GRAMD1AQ96CP6 724 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 MIPEPQ99797 713 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 SLX1AQ9BQ83 275 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 GPR88Q9GZN0 384 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 GRHL1Q9NZI5 618 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 RBBP6Q7Z6E9 1792 aaKnown RBP14.71□□□□□ -0.06
LIG1-203ENST00000536218 MROH7Q68CQ1 1323 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 MAFGO15525 162 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 SPAG7O75391 227 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 NCKAP1LP55160 1127 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 ADARP55265 1226 aaKnown RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 PLOD1Q02809 727 aaPredicted RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 THOC5Q13769 683 aaKnown RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 SLC44A4Q53GD3 710 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 LMBRD2Q68DH5 695 aaPredicted RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 OLFM3Q96PB7 478 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 CADM1Q9BY67 442 aaKnown RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 FHDC1Q9C0D6 1143 aaPredicted RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 TMEM117Q9H0C3 514 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 CYP26B1Q9NR63 512 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 KRT82Q9NSB4 513 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 TUBGCP4Q9UGJ1 667 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 SSC5DA1L4H1 1573 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 MAPTP10636 758 aaKnown RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 ATP5DP30049 168 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 IL9RQ01113 521 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 ACVR2BQ13705 512 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 SYCE1Q8N0S2 351 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 LMO3Q8TAP4 145 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 SMC6Q96SB8 1091 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 SIKE1Q9BRV8 207 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 POLR3FQ9H1D9 316 aaPredicted RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 XPNPEP1Q9NQW7 623 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 EXOC7Q9UPT5 735 aa14.7□□□□□ -0.06
LIG1-203ENST00000536218 TDRKHQ9Y2W6 561 aaKnown RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 BRCA1P38398 1863 aaKnown RBP14.7□□□□□ -0.06
LIG1-203ENST00000536218 FAM187AA6NFU0 413 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 GYG2O15488 501 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 YARSP54577 528 aaKnown RBP14.69□□□□□ -0.06
LIG1-203ENST00000536218 HPCAP84074 193 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 MTDHQ86UE4 582 aaKnown RBP14.69□□□□□ -0.06
LIG1-203ENST00000536218 NME8Q8N427 588 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 STKLD1Q8NE28 680 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 FAM213AQ9BRX8 229 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 SPATA31C2B4DYI2 1134 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 POTEJP0CG39 1038 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 MFSD5Q6N075 450 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 ABHD15Q6UXT9 468 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 SATL1Q86VE3 508 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 SCUBE1Q8IWY4 988 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 SH3TC2Q8TF17 1288 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 CDHR1Q96JP9 859 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 NR1H4Q96RI1 486 aaPredicted RBP14.69□□□□□ -0.06
LIG1-203ENST00000536218 CDC42EP4Q9H3Q1 356 aaKnown RBP14.69□□□□□ -0.06
LIG1-203ENST00000536218 SH3GLB1Q9Y371 365 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 COL11A1P12107 1806 aaPredicted RBP14.69□□□□□ -0.06
LIG1-203ENST00000536218 CFAP69A5D8W1 941 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 TMEM221A6NGB7 291 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 STBD1O95210 358 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 PGK2P07205 417 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 ZBTB48P10074 688 aaPredicted RBP14.69□□□□□ -0.06
LIG1-203ENST00000536218 RARGP13631 454 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 GSTA3Q16772 222 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 LRRC36Q1X8D7 754 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 C10orf76Q5T2E6 689 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 ZNF554Q86TJ5 538 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 CCDC105Q8IYK2 499 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 SEMA4DQ92854 862 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 TTC1Q99614 292 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 UBN1Q9NPG3 1134 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 DCTN4Q9UJW0 460 aa14.69□□□□□ -0.06
LIG1-203ENST00000536218 BARX2Q9UMQ3 279 aaPredicted RBP14.69□□□□□ -0.06
LIG1-203ENST00000536218 CALCAP01258 141 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 CCDC92Q53HC0 331 aaPredicted RBP14.68□□□□□ -0.06
LIG1-203ENST00000536218 SLC39A4Q6P5W5 647 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 ISLR2Q6UXK2 745 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 NCCRP1Q6ZVX7 275 aaPredicted RBP14.68□□□□□ -0.06
LIG1-203ENST00000536218 LZICQ8WZA0 190 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 RUNDC3BQ96NL0 473 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 CATSPER2Q96P56 530 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 PI4K2AQ9BTU6 479 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 TMEM109Q9BVC6 243 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 SYNCQ9H7C4 482 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 ZNF302Q9NR11 478 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 SPATA7Q9P0W8 599 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 LRRIQ4A6NIV6 560 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 BOLA2-SMG1P6H3BVE0 249 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 E2F6O75461 281 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 DGAT1O75907 488 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 SUPT20HL2P0C7V6 817 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 HARSP12081 509 aaKnown RBP14.68□□□□□ -0.06
LIG1-203ENST00000536218 DOCK1Q14185 1865 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 MYBPC2Q14324 1141 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 TNFAIP8L3Q5GJ75 292 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 DCAF12L1Q5VU92 463 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 LBX2Q6XYB7 198 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms