RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GUCY1A2P33402 732 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 CA8P35219 290 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 ADRA1BP35368 520 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 NOVA1P51513 510 aaKnown RBP4.68□□□□□ -1.66
YBX3-205ENST00000536107 RAC3P60763 192 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 ICA1Q05084 483 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 KCNA1Q09470 495 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 NONOQ15233 471 aaKnown RBP eCLIP4.68□□□□□ -1.66
YBX3-205ENST00000536107 DUSP6Q16828 381 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 INF2Q27J81 1249 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 NAALADL2Q58DX5 795 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 PLEKHG4Q58EX7 1191 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 ATAT1Q5SQI0 421 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 FAM83BQ5T0W9 1011 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 GORABQ5T7V8 394 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 TAPT1Q6NXT6 567 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 Q6ZPA2 131 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 ATG9AQ7Z3C6 839 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 GPR155Q7Z3F1 870 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 DHX37Q8IY37 1157 aaKnown RBP4.68□□□□□ -1.66
YBX3-205ENST00000536107 MAML2Q8IZL2 1156 aaPredicted RBP4.68□□□□□ -1.66
YBX3-205ENST00000536107 P2RX5Q93086 422 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 TRMT2BQ96GJ1 504 aaKnown RBP4.68□□□□□ -1.66
YBX3-205ENST00000536107 FGD4Q96M96 766 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 SLF1Q9BQI6 1058 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 SCNM1Q9BWG6 230 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 VCPKMTQ9H867 229 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 RAVER2Q9HCJ3 691 aaKnown RBP4.68□□□□□ -1.66
YBX3-205ENST00000536107 ADAMTS5Q9UNA0 930 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 RAI2Q9Y5P3 530 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 MYO7AQ13402 2215 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 ATAD5Q96QE3 1844 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 HECTD1Q9ULT8 2610 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 TADA3O75528 432 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 TOP3BO95985 862 aaKnown RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 KNG1P01042 644 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 ZNF853P0CG23 659 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 IBSPP21815 317 aaPredicted RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 SHMT1P34896 483 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 RPL11P62913 178 aaKnown RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 MRPS21P82921 87 aaKnown RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 ITIH3Q06033 890 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 CCDC6Q16204 474 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 TWISTNBQ3B726 338 aaPredicted RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 ZNF568Q3ZCX4 644 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 PAN2Q504Q3 1202 aaKnown RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 EMC4Q5J8M3 183 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 RARS2Q5T160 578 aaKnown RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 PLPP4Q5VZY2 271 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 KIAA1211LQ6NV74 962 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 TSSK4Q6SA08 328 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 TMEM179Q6ZVK1 233 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 CEP68Q76N32 757 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 OTOP3Q7RTS5 596 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 BHLHA9Q7RTU4 235 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 TMEM87AQ8NBN3 555 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 ZBTB44Q8NCP5 570 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 REPS2Q8NFH8 660 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 HNRNPLLQ8WVV9 542 aaKnown RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 CASP10Q92851 521 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 CLIP3Q96DZ5 547 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 NEUROD6Q96NK8 337 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 ALG1Q9BT22 464 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 MYL10Q9BUA6 226 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 CLMPQ9H6B4 373 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 VTA1Q9NP79 307 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 GPRC5CQ9NQ84 441 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 ENTPD7Q9NQZ7 604 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 ARHGEF3Q9NR81 526 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 GGT7Q9UJ14 662 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 ISY1Q9ULR0 285 aaKnown RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 TMX2Q9Y320 296 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 PCDHB4Q9Y5E5 795 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 TIMM13Q9Y5L4 95 aaPredicted RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 MRPL42Q9Y6G3 142 aaKnown RBP4.67□□□□□ -1.66
YBX3-205ENST00000536107 ZNF462Q96JM2 2506 aa4.67□□□□□ -1.66
YBX3-205ENST00000536107 RALGAPA2Q2PPJ7 1873 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 MYO18BQ8IUG5 2567 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 LOC400499M0QZD8 3231 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.66□□□□□ -1.66
YBX3-205ENST00000536107 ALDH1L1O75891 902 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 EPHX1P07099 455 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 NBPF7P0C2Y1 421 aaPredicted RBP4.66□□□□□ -1.66
YBX3-205ENST00000536107 LINC00271P0C7V0 271 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 GLULP15104 373 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 TIMM10P62072 90 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 DYNLL1P63167 89 aaKnown RBP4.66□□□□□ -1.66
YBX3-205ENST00000536107 RBL2Q08999 1139 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 SCRN1Q12765 414 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 MVPQ14764 893 aaKnown RBP4.66□□□□□ -1.66
YBX3-205ENST00000536107 UBXN2BQ14CS0 331 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 PPP2R5BQ15173 497 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 STPG1Q5TH74 334 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 IQCEQ6IPM2 695 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 DCLRE1AQ6PJP8 1040 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 TMEM184AQ6ZMB5 413 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 HS2ST1Q7LGA3 356 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 CELF5Q8N6W0 485 aaKnown RBP4.66□□□□□ -1.66
YBX3-205ENST00000536107 C12orf76Q8N812 135 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms