RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 GRB14Q14449 540 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 DUSP28Q4G0W2 176 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 ERMARDQ5T6L9 678 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 PRUNE1Q86TP1 453 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 KIAA0319LQ8IZA0 1049 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 SCLT1Q96NL6 688 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 CPXM1Q96SM3 734 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 PTPN18Q99952 460 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 ELOVL4Q9GZR5 314 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 DDX20Q9UHI6 824 aaKnown RBP14.12□□□□□ -0.15
VPS33B-202ENST00000535906 CENPFP49454 3210 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 A0A1B0GUA9 196 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 TLDC2A0PJX2 215 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 RGS16O15492 202 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-202ENST00000535906 MED7O43513 233 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 CILPO75339 1184 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 KRT1P04264 644 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 ATF7P17544 494 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-202ENST00000535906 ADCY8P40145 1251 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 MMP13P45452 471 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 TAP1Q03518 808 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 TMEM132DQ14C87 1099 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 LRRC38Q5VT99 294 aa14.12□□□□□ -0.15
VPS33B-202ENST00000535906 RBM41Q96IZ5 413 aaKnown RBP14.12□□□□□ -0.15
VPS33B-202ENST00000535906 SMIM23A6NLE4 172 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 AGTP01019 485 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 KRT3P12035 628 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 PTPN11Q06124 597 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-202ENST00000535906 IFT88Q13099 833 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 ACVR2BQ13705 512 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 QPCTQ16769 361 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 NIPA2Q8N8Q9 360 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 OR6J1Q8NGC5 347 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 JOSD2Q8TAC2 188 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 NPLOC4Q8TAT6 608 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 MDM1Q8TC05 714 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 PPP1R13LQ8WUF5 828 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 TMEM176AQ96HP8 235 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 HPDLQ96IR7 371 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 FAXDC2Q96IV6 333 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 XPO6Q96QU8 1125 aaKnown RBP14.11□□□□□ -0.15
VPS33B-202ENST00000535906 TINF2Q9BSI4 451 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 DDX23Q9BUQ8 820 aaKnown RBP14.11□□□□□ -0.15
VPS33B-202ENST00000535906 CDC42EP4Q9H3Q1 356 aaKnown RBP14.11□□□□□ -0.15
VPS33B-202ENST00000535906 VRTNQ9H8Y1 702 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 STRIP2Q9ULQ0 834 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 AGAP1Q9UPQ3 857 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 SIGLEC16A6NMB1 481 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 ECM2O94769 699 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-202ENST00000535906 HOXD8P13378 290 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-202ENST00000535906 ATF2P15336 505 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 ATICP31939 592 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 KIZQ2M2Z5 673 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 SPOCD1Q6ZMY3 1216 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 ARFGAP1Q8N6T3 406 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 EPS8L3Q8TE67 593 aaKnown RBP14.11□□□□□ -0.15
VPS33B-202ENST00000535906 KAT2BQ92831 832 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 PWWP2AQ96N64 755 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 ACAP3Q96P50 834 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 CXCL16Q9H2A7 254 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 ABHD16BQ9H3Z7 469 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 SETD4Q9NVD3 440 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 DNAJC17Q9NVM6 304 aaKnown RBP14.11□□□□□ -0.15
VPS33B-202ENST00000535906 DNPEPQ9ULA0 475 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 CITO14578 2027 aa14.11□□□□□ -0.15
VPS33B-202ENST00000535906 TRIP11Q15643 1979 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 LIASO43766 372 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 ERBB2P04626 1255 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 CETN2P41208 172 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 PSMC1P62191 440 aaKnown RBP14.1□□□□□ -0.15
VPS33B-202ENST00000535906 TMEM62Q0P6H9 643 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 DGKDQ16760 1214 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 TNFAIP8L3Q5GJ75 292 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 RNF187Q5TA31 235 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-202ENST00000535906 SMYD5Q6GMV2 418 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 ZNF365Q70YC5 407 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 TRMT10CQ7L0Y3 403 aaKnown RBP14.1□□□□□ -0.15
VPS33B-202ENST00000535906 SEC16BQ96JE7 1060 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 TRAIPQ9BWF2 469 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 ADAM7Q9H2U9 754 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 DPP3Q9NY33 737 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 ANAPC5Q9UJX4 755 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 GINS2Q9Y248 185 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 CAPN7Q9Y6W3 813 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 MICAL2O94851 1124 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 TJP3O95049 919 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 CHN1P15882 459 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 PSMA2P25787 234 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 KLRC2P26717 231 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 SLCO1A2P46721 670 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 IFI35P80217 286 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-202ENST00000535906 GPR162Q16538 588 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 PLEKHH3Q7Z736 793 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 XYLT1Q86Y38 959 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 EMC1Q8N766 993 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 GLIS1Q8NBF1 620 aa14.1□□□□□ -0.15
VPS33B-202ENST00000535906 STMN4Q9H169 189 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-202ENST00000535906 GBA2Q9HCG7 927 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-202ENST00000535906 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.1□□□□□ -0.15
VPS33B-202ENST00000535906 hCG_1818297A0A087WSY0 165 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms