RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 BOLLQ8N9W6 283 aaKnown RBP6.39□□□□□ -1.39
PRKDC-205ENST00000535375 MRGPRX1Q96LB2 322 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 P2RX7Q99572 595 aaKnown RBP6.39□□□□□ -1.39
PRKDC-205ENST00000535375 ALG8Q9BVK2 526 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 SPATA5L1Q9BVQ7 753 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 C1orf112Q9NSG2 853 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 GOLGA6AQ9NYA3 693 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 MED16Q9Y2X0 877 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 SPATA31A6Q5VVP1 1343 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 RHOP08100 348 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 XRCC6P12956 609 aaKnown RBP eCLIP6.38□□□□□ -1.39
PRKDC-205ENST00000535375 PTH2RP49190 550 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 UCP3P55916 312 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 LOXL3P58215 753 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 TBCCQ15814 346 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 TXNRD1Q16881 649 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 FAM153CQ494X1 144 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 PLAC9Q5JTB6 97 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 VPS53Q5VIR6 699 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 ICE2Q659A1 982 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 PPP4R4Q6NUP7 873 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 DPY19L2P1Q6NXN4 242 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 MYO1HQ8N1T3 1032 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 OR6B3Q8NGW1 331 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 RUNDC1Q96C34 613 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 PBKQ96KB5 322 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 FAM204AQ9H8W3 233 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 EHD3Q9NZN3 535 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 PTGFRNQ9P2B2 879 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 XPR1Q9UBH6 696 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 SHOC2Q9UQ13 582 aa6.38□□□□□ -1.39
PRKDC-205ENST00000535375 ADGRA2Q96PE1 1338 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 CAPN8A6NHC0 703 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 FAM227AF5H4B4 570 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 MGST3O14880 152 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 PHGDHO43175 533 aaKnown RBP6.37□□□□□ -1.39
PRKDC-205ENST00000535375 PRPF3O43395 683 aaKnown RBP6.37□□□□□ -1.39
PRKDC-205ENST00000535375 TSPAN6O43657 245 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 URI1O94763 535 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-205ENST00000535375 TTLL1O95922 423 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 NR2F6P10588 404 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 KITP10721 976 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 AGFG1P52594 562 aaKnown RBP6.37□□□□□ -1.39
PRKDC-205ENST00000535375 LILRA4P59901 499 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 BMPR2Q13873 1038 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 TEDDM1Q5T9Z0 273 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 LMBRD2Q68DH5 695 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-205ENST00000535375 OVCH2Q7RTZ1 564 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 PRIMA1Q86XR5 153 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.37□□□□□ -1.39
PRKDC-205ENST00000535375 KBTBD7Q8WVZ9 684 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 ATRIPQ8WXE1 791 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 NT5C1BQ96P26 610 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 PTDSS2Q9BVG9 487 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 B3GNT5Q9BYG0 378 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 TMEM60Q9H2L4 133 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 ZMAT3Q9HA38 289 aaKnown RBP6.37□□□□□ -1.39
PRKDC-205ENST00000535375 IL17RBQ9NRM6 502 aa6.37□□□□□ -1.39
PRKDC-205ENST00000535375 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-205ENST00000535375 CFAP69A5D8W1 941 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 DCLK1O15075 740 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 PPM1DO15297 605 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 TBC1D4O60343 1298 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 CYP2C9P11712 490 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 ZFXP17010 805 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-205ENST00000535375 VIPR2P41587 438 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 ZNF134P52741 427 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 EIF2B5Q13144 721 aaKnown RBP6.36□□□□□ -1.39
PRKDC-205ENST00000535375 TSTD2Q5T7W7 516 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 ARHGAP40Q5TG30 622 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 MAEAQ7L5Y9 396 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 SLC15A4Q8N697 577 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 DNAJC5GQ8N7S2 189 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 UROC1Q96N76 676 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 HAPLN3Q96S86 360 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 KLK15Q9H2R5 256 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 CPNE5Q9HCH3 593 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 ALG13Q9NP73 1137 aaKnown RBP6.36□□□□□ -1.39
PRKDC-205ENST00000535375 ASB6Q9NWX5 421 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 SERTAD3Q9UJW9 196 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 ST3GAL5Q9UNP4 418 aa6.36□□□□□ -1.39
PRKDC-205ENST00000535375 WDR27A2RRH5 827 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 LINC00473A8K010 186 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 VWC2LB2RUY7 222 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 BTN3A1O00481 513 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 NXPH3O95157 252 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 NPR1P16066 1061 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 GPD1P21695 349 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 PPIFP30405 207 aaKnown RBP6.35□□□□□ -1.39
PRKDC-205ENST00000535375 SLC7A1P30825 629 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 ALDH9A1P49189 494 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 SLC11A2P49281 568 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 E2F2Q14209 437 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 LLGL1Q15334 1064 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 SLC44A4Q53GD3 710 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 ZNF362Q5T0B9 420 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-205ENST00000535375 MPP5Q8N3R9 675 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 TRIM54Q9BYV2 358 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 R3HDMLQ9H3Y0 253 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms