RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 BMP6P22004 513 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 CCR2P41597 374 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 MYL6P60660 151 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 RPL10AP62906 217 aaKnown RBP10.53□□□□□ -0.72
NUP98-220ENST00000533346 STIM1Q13586 685 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 NCOA4Q13772 614 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 CEP135Q66GS9 1140 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 ANKRD40Q6AI12 368 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 VSTM1Q6UX27 236 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 C4orf50Q6ZRC1 276 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 FILIP1Q7Z7B0 1213 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 FAM186BQ8IYM0 893 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 SMYD4Q8IYR2 804 aaPredicted RBP10.53□□□□□ -0.72
NUP98-220ENST00000533346 MYCBPAPQ8TBZ2 947 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 E2F7Q96AV8 911 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 ELSPBP1Q96BH3 223 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 TRMT2BQ96GJ1 504 aaKnown RBP10.53□□□□□ -0.72
NUP98-220ENST00000533346 FAM84AQ96KN4 292 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 CEP63Q96MT8 703 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 CORO1BQ9BR76 489 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 IL21Q9HBE4 155 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 TMEM8AQ9HCN3 771 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 TRPV5Q9NQA5 729 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 ASAH2Q9NR71 780 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 TMLHEQ9NVH6 421 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 KIAA1468Q9P260 1216 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 GTF3C4Q9UKN8 822 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 POLIQ9UNA4 740 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 SLC27A5Q9Y2P5 690 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 COQ4Q9Y3A0 265 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 NME7Q9Y5B8 376 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 ZNF638Q14966 1978 aaKnown RBP10.53□□□□□ -0.72
NUP98-220ENST00000533346 KIF26AQ9ULI4 1882 aaPredicted RBP10.53□□□□□ -0.72
NUP98-220ENST00000533346 MYBPHLA2RUH7 354 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 PSMA7O14818 248 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 STX10O60499 249 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 NOL4O94818 638 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 CSH1P0DML2 217 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 CSH2P0DML3 217 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 P4HA1P13674 534 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 HMGA1P17096 107 aaKnown RBP10.52□□□□□ -0.73
NUP98-220ENST00000533346 SP100P23497 879 aaPredicted RBP10.52□□□□□ -0.73
NUP98-220ENST00000533346 LMO2P25791 158 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 GNL1P36915 607 aaPredicted RBP10.52□□□□□ -0.73
NUP98-220ENST00000533346 PMS1P54277 932 aaKnown RBP10.52□□□□□ -0.73
NUP98-220ENST00000533346 MARSP56192 900 aaKnown RBP10.52□□□□□ -0.73
NUP98-220ENST00000533346 TNNC1P63316 161 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 PPP3CAQ08209 521 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 MGAT5BQ3V5L5 792 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 ZNF667Q5HYK9 610 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 KRT39Q6A163 491 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 SMYD5Q6GMV2 418 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 PARM1Q6UWI2 310 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 GAREM2Q75VX8 874 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 FRMD5Q7Z6J6 570 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 UNC93AQ86WB7 457 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 HS6ST3Q8IZP7 471 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 CRYBG2Q8N1P7 616 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 TTC9BQ8N6N2 239 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 FGF14Q92915 247 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 SPATA17Q96L03 361 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 ASB16Q96NS5 453 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 TSG101Q99816 390 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 SYT15Q9BQS2 421 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 MRPL45Q9BRJ2 306 aaKnown RBP10.52□□□□□ -0.73
NUP98-220ENST00000533346 BCO2Q9BYV7 579 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 METTL14Q9HCE5 456 aaKnown RBP10.52□□□□□ -0.73
NUP98-220ENST00000533346 CRTAC1Q9NQ79 661 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 OBP2AQ9NY56 170 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 NUMBLQ9Y6R0 609 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 ZNF318Q5VUA4 2279 aa10.52□□□□□ -0.73
NUP98-220ENST00000533346 USP34Q70CQ2 3546 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 COL4A2P08572 1712 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 BICDL2A1A5D9 508 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 PHACTR2O75167 634 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 F11P03951 625 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 EPB41P11171 864 aaKnown RBP10.51□□□□□ -0.73
NUP98-220ENST00000533346 CD44P16070 742 aaKnown RBP10.51□□□□□ -0.73
NUP98-220ENST00000533346 CEBPBP17676 345 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 PFKLP17858 780 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 FCARP24071 287 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 DDX6P26196 483 aaKnown RBP eCLIP10.51□□□□□ -0.73
NUP98-220ENST00000533346 CDC25CP30307 473 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 CLCN5P51795 746 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 MLLT6P55198 1093 aaPredicted RBP10.51□□□□□ -0.73
NUP98-220ENST00000533346 INCA1Q0VD86 236 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 BIRC3Q13489 604 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 VEPH1Q14D04 833 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 ZNF699Q32M78 642 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 TTI2Q6NXR4 508 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 HFE2Q6ZVN8 426 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 FBXL6Q8N531 539 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 TTC39CQ8N584 583 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 SHKBP1Q8TBC3 707 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 ERCC4Q92889 916 aaPredicted RBP10.51□□□□□ -0.73
NUP98-220ENST00000533346 SMARCD2Q92925 531 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 TCEAL4Q96EI5 215 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 MMS19Q96T76 1030 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 CYP3A43Q9HB55 503 aa10.51□□□□□ -0.73
NUP98-220ENST00000533346 MAGEC2Q9UBF1 373 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms