RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 KRT3P12035 628 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 ARSEP51690 589 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 SLC25A11Q02978 314 aaKnown RBP16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 ARHGAP1Q07960 439 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 TTLL4Q14679 1199 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 ZNF667Q5HYK9 610 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 ZCCHC9Q8N567 271 aaKnown RBP16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 EMC1Q8N766 993 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 BBOF1Q8ND07 529 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 CPB2Q96IY4 423 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 TMEM121Q9BTD3 319 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 LHX5Q9H2C1 402 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 ERAP1Q9NZ08 941 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 RNF181Q9P0P0 153 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 TBK1Q9UHD2 729 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 CEP83Q9Y592 693 aa16.18■□□□□ 0.18
CACNA1E-208ENST00000533229 SIGLEC16A6NMB1 481 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 DNM1LO00429 736 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 DNALI1O14645 258 aaPredicted RBP16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 TCEA3O75764 348 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 PSMA2P25787 234 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 GJA5P36382 358 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 COPS2P61201 443 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 YWHAEP62258 255 aaKnown RBP16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 TAP1Q03518 808 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 ARMCX2Q7L311 632 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 PIGWQ7Z7B1 504 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 MGARPQ8TDB4 240 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 ELOVL4Q9GZR5 314 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 MROH8Q9H579 483 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 C10orf88Q9H8K7 445 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 ZWILCHQ9H900 591 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 NAALADL1Q9UQQ1 740 aa16.17■□□□□ 0.18
CACNA1E-208ENST00000533229 ERBB2P04626 1255 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 PTPN7P35236 360 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 MAGEA4P43358 317 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 PSMC1P62191 440 aaKnown RBP16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 LMNB2Q03252 620 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 GPS1Q13098 491 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 FASTKD3Q14CZ7 662 aaKnown RBP16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 HP1BP3Q5SSJ5 553 aaPredicted RBP16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 CYP4F22Q6NT55 531 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 MAMDC4Q6UXC1 1216 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 XYLT1Q86Y38 959 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 NFKBIZQ9BYH8 718 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 MLXIPLQ9NP71 852 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 ASAP2O43150 1006 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 IL18RAPO95256 599 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 VTNP04004 478 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 LGALS2P05162 132 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 CD48P09326 243 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 PECAM1P16284 738 aaPredicted RBP16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 OSBPP22059 807 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 VCPP55072 806 aaKnown RBP16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 DYNLT1P63172 113 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 ACTN3Q08043 901 aaPredicted RBP16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 PDE4CQ08493 712 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 SLC10A6Q3KNW5 377 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 TAPT1Q6NXT6 567 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 CCDC121Q6ZUS5 278 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 PDZD7Q9H5P4 517 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 PRMT7Q9NVM4 692 aaPredicted RBP16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 DDX56Q9NY93 547 aaKnown RBP16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 EURLQ9NYK6 297 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 STRIP2Q9ULQ0 834 aa16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 DRG1Q9Y295 367 aaKnown RBP16.16■□□□□ 0.18
CACNA1E-208ENST00000533229 CILPO75339 1184 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 GH1P01241 217 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 ADCY1Q08828 1119 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 TAF5Q15542 800 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 POLNQ7Z5Q5 900 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 CCDC13Q8IYE1 715 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 LINC01465Q8N7H1 131 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 SLC35B2Q8TB61 432 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 CCT6BQ92526 530 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 NKD2Q969F2 451 aaPredicted RBP16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 SAYSD1Q9NPB0 183 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 METTL5Q9NRN9 209 aaKnown RBP16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 VIMP08670 466 aaKnown RBP16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 ARF4P18085 180 aaPredicted RBP16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 GCAP28676 217 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 GDF10P55107 478 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 PLCB3Q01970 1234 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 PTPN11Q06124 597 aaPredicted RBP16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 CCDC142Q17RM4 750 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 ANKRD20A8PQ5CZ79 823 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 FASTKD5Q7L8L6 764 aaKnown RBP16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 ELAC2Q9BQ52 826 aaKnown RBP16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 KCNK9Q9NPC2 374 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 LGALS13Q9UHV8 139 aa16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 TPX2Q9ULW0 747 aaKnown RBP16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.15■□□□□ 0.18
CACNA1E-208ENST00000533229 MED7O43513 233 aa16.14■□□□□ 0.17
CACNA1E-208ENST00000533229 MICAL2O94851 1124 aa16.14■□□□□ 0.17
CACNA1E-208ENST00000533229 IFNB1P01574 187 aa16.14■□□□□ 0.17
CACNA1E-208ENST00000533229 ITGAVP06756 1048 aa16.14■□□□□ 0.17
CACNA1E-208ENST00000533229 ZNF286BP0CG31 522 aa16.14■□□□□ 0.17
CACNA1E-208ENST00000533229 BRAFP15056 766 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms