RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 KBTBD7Q8WVZ9 684 aa19.65■□□□□ 0.74
SMPD1-208ENST00000533123 BARX2Q9UMQ3 279 aaPredicted RBP19.65■□□□□ 0.74
SMPD1-208ENST00000533123 FAN1Q9Y2M0 1017 aa19.65■□□□□ 0.74
SMPD1-208ENST00000533123 SLC4A7Q9Y6M7 1214 aa19.65■□□□□ 0.74
SMPD1-208ENST00000533123 NCANO14594 1321 aa19.65■□□□□ 0.74
SMPD1-208ENST00000533123 GJB5O95377 273 aa19.64■□□□□ 0.74
SMPD1-208ENST00000533123 GALTP07902 379 aa19.64■□□□□ 0.74
SMPD1-208ENST00000533123 DNA2P51530 1060 aa19.64■□□□□ 0.74
SMPD1-208ENST00000533123 INCA1Q0VD86 236 aa19.64■□□□□ 0.74
SMPD1-208ENST00000533123 WSCD1Q658N2 575 aa19.64■□□□□ 0.74
SMPD1-208ENST00000533123 RSRC2Q7L4I2 434 aaKnown RBP19.64■□□□□ 0.74
SMPD1-208ENST00000533123 OR6B3Q8NGW1 331 aa19.64■□□□□ 0.74
SMPD1-208ENST00000533123 CTNNBL1Q8WYA6 563 aaPredicted RBP19.64■□□□□ 0.74
SMPD1-208ENST00000533123 CWH43Q9H720 699 aa19.64■□□□□ 0.74
SMPD1-208ENST00000533123 NME7Q9Y5B8 376 aa19.64■□□□□ 0.74
SMPD1-208ENST00000533123 HCRTO43612 131 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 TADA2AO75478 443 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 MAGEA10P43363 369 aaPredicted RBP19.64■□□□□ 0.73
SMPD1-208ENST00000533123 ZNF132P52740 706 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 BCAR1P56945 870 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 LIMS2Q7Z4I7 341 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 ADGRF2Q8IZF7 708 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 TOP6BLQ8N6T0 577 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 LRRC57Q8N9N7 239 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 TPCN2Q8NHX9 752 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 ZBED2Q9BTP6 218 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 ELOVL4Q9GZR5 314 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 ISCUQ9H1K1 167 aa19.64■□□□□ 0.73
SMPD1-208ENST00000533123 A0A0A6YYK5 440 aaPredicted RBP19.63■□□□□ 0.73
SMPD1-208ENST00000533123 RAD23BP54727 409 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 SPOUT1Q5T280 376 aaKnown RBP19.63■□□□□ 0.73
SMPD1-208ENST00000533123 DPH6Q7L8W6 267 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 TMEM173Q86WV6 379 aaPredicted RBP19.63■□□□□ 0.73
SMPD1-208ENST00000533123 SLC35G2Q8TBE7 412 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 OSBPL9Q96SU4 736 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 TMEM175Q9BSA9 504 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 ANKRD62A6NC57 917 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 TMEM189-UBE2V1I3L0A0 370 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 PDE2AO00408 941 aaPredicted RBP19.63■□□□□ 0.73
SMPD1-208ENST00000533123 PDGFRBP09619 1106 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 LMO2P25791 158 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 GNA15P30679 374 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 ALDH7A1P49419 539 aaKnown RBP19.63■□□□□ 0.73
SMPD1-208ENST00000533123 C9orf50Q5SZB4 431 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 MEI1Q5TIA1 1274 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 RFFLQ8WZ73 363 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 GOLGA1Q92805 767 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 MARCH5Q9NX47 278 aa19.63■□□□□ 0.73
SMPD1-208ENST00000533123 CHORDC1Q9UHD1 332 aaPredicted RBP19.63■□□□□ 0.73
SMPD1-208ENST00000533123 ATMINO43313 823 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-208ENST00000533123 ATP2A2P16615 1042 aaKnown RBP19.62■□□□□ 0.73
SMPD1-208ENST00000533123 GNL1P36915 607 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-208ENST00000533123 CMTR2Q8IYT2 770 aaKnown RBP19.62■□□□□ 0.73
SMPD1-208ENST00000533123 SLC4A11Q8NBS3 891 aa19.62■□□□□ 0.73
SMPD1-208ENST00000533123 TMEM176AQ96HP8 235 aa19.62■□□□□ 0.73
SMPD1-208ENST00000533123 SUSD3Q96L08 255 aa19.62■□□□□ 0.73
SMPD1-208ENST00000533123 COLEC11Q9BWP8 271 aa19.62■□□□□ 0.73
SMPD1-208ENST00000533123 NT5C1AQ9BXI3 368 aa19.62■□□□□ 0.73
SMPD1-208ENST00000533123 OGFRQ9NZT2 677 aa19.62■□□□□ 0.73
SMPD1-208ENST00000533123 ADAM28Q9UKQ2 775 aa19.62■□□□□ 0.73
SMPD1-208ENST00000533123 COG5Q9UP83 839 aa19.62■□□□□ 0.73
SMPD1-208ENST00000533123 HYOU1Q9Y4L1 999 aa19.62■□□□□ 0.73
SMPD1-208ENST00000533123 MRPL42Q9Y6G3 142 aaKnown RBP19.62■□□□□ 0.73
SMPD1-208ENST00000533123 CTAGE15A4D2H0 777 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 A8MXQ7 604 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 M0QZQ0 153 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 RTN2O75298 545 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 CTAGE8P0CG41 777 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 SSTR3P32745 418 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-208ENST00000533123 BPIFB4P59827 614 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 CTAGE6Q86UF2 777 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 OSTM1Q86WC4 334 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 CREG2Q8IUH2 290 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 HERC6Q8IVU3 1022 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 CTAGE4Q8IX94 777 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 TTC39CQ8N584 583 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 SNX25Q9H3E2 840 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 SMARCAL1Q9NZC9 954 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 TNRC18O15417 2968 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-208ENST00000533123 CFHP08603 1231 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 ODC1P11926 461 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 HTRA4P83105 476 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-208ENST00000533123 IFI16Q16666 785 aaKnown RBP19.61■□□□□ 0.73
SMPD1-208ENST00000533123 SLC9A7Q96T83 725 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 MTIF3Q9H2K0 278 aaKnown RBP19.61■□□□□ 0.73
SMPD1-208ENST00000533123 DPEP3Q9H4B8 488 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 FAM124BQ9H5Z6 455 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-208ENST00000533123 EHD2Q9NZN4 543 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 STXBP5LQ9Y2K9 1186 aa19.61■□□□□ 0.73
SMPD1-208ENST00000533123 THAP12O43422 761 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 GZMAP12544 262 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 CD19P15391 556 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 WARSP23381 471 aaKnown RBP19.6■□□□□ 0.73
SMPD1-208ENST00000533123 PAX3P23760 479 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 BRD2P25440 801 aaKnown RBP19.6■□□□□ 0.73
SMPD1-208ENST00000533123 ACOT1Q86TX2 421 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 NOA1Q8NC60 698 aaKnown RBP19.6■□□□□ 0.73
SMPD1-208ENST00000533123 BCL7CQ8WUZ0 217 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-208ENST00000533123 ZNF606Q8WXB4 792 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 TFAP2BQ92481 460 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms