RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 STAU1O95793 577 aaKnown RBP32.44■■■□□ 2.78
SSSCA1-207ENST00000533115 MYL6P60660 151 aa32.44■■■□□ 2.78
SSSCA1-207ENST00000533115 SNW1Q13573 536 aaKnown RBP32.44■■■□□ 2.78
SSSCA1-207ENST00000533115 WDR72Q3MJ13 1102 aa32.44■■■□□ 2.78
SSSCA1-207ENST00000533115 PHLDB3Q6NSJ2 640 aa32.44■■■□□ 2.78
SSSCA1-207ENST00000533115 ENGASEQ8NFI3 743 aa32.44■■■□□ 2.78
SSSCA1-207ENST00000533115 CDH9Q9ULB4 789 aa32.44■■■□□ 2.78
SSSCA1-207ENST00000533115 FRMD4BQ9Y2L6 1034 aa32.44■■■□□ 2.78
SSSCA1-207ENST00000533115 MYBPHLA2RUH7 354 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 GALR2O43603 387 aaPredicted RBP32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 LMO2P25791 158 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 ATICP31939 592 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 TNNC1P63316 161 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 BIRC3Q13489 604 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 PNOCQ13519 176 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 CCDC142Q17RM4 750 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 TDRD10Q5VZ19 366 aaKnown RBP32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 CEP135Q66GS9 1140 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 FAM171BQ6P995 826 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 SYT15Q9BQS2 421 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 XYLT2Q9H1B5 865 aa32.43■■■□□ 2.78
SSSCA1-207ENST00000533115 TACC1O75410 805 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 FAM163BP0C2L3 166 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 CYP2F1P24903 491 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 VIPR2P41587 438 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 FAM160A1Q05DH4 1040 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 NFIL3Q16649 462 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 CFAP221Q4G0U5 840 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 SLC44A4Q53GD3 710 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 ARHGAP15Q53QZ3 475 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 STXBP5Q5T5C0 1151 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 SPATA2LQ8IUW3 424 aaPredicted RBP32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 SYAP1Q96A49 352 aaPredicted RBP32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 SHDQ96IW2 340 aa32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 MRPL45Q9BRJ2 306 aaKnown RBP32.42■■■□□ 2.78
SSSCA1-207ENST00000533115 ATP2C2O75185 946 aa32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 C4BPAP04003 597 aaKnown RBP32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 CDC25CP30307 473 aa32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 GPR15P49685 360 aa32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 STARD6P59095 220 aa32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 RPL10AP62906 217 aaKnown RBP32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 DLG4P78352 724 aa32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 GRM2Q14416 872 aa32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 TMC2Q8TDI7 906 aa32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 FUBP3Q96I24 572 aaKnown RBP eCLIP32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 SNX25Q9H3E2 840 aa32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 IL21Q9HBE4 155 aa32.41■■■□□ 2.78
SSSCA1-207ENST00000533115 PDGFRBP09619 1106 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 PSMC3P17980 439 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 NR2F2P24468 414 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 GNL1P36915 607 aaPredicted RBP32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 PSMC1P62191 440 aaKnown RBP32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 PRKCQQ04759 706 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 MLF2Q15773 248 aaPredicted RBP32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 GPR158Q5T848 1215 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 VITQ6UXI7 678 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 C4orf50Q6ZRC1 276 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 E2F7Q96AV8 911 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 GCNAQ96QF7 691 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 MKNK1Q9BUB5 465 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 TRMT61BQ9BVS5 477 aaKnown RBP32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 VRTNQ9H8Y1 702 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 CRTAC1Q9NQ79 661 aa32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 NXF1Q9UBU9 619 aaKnown RBP32.4■■■□□ 2.78
SSSCA1-207ENST00000533115 MAPK13O15264 365 aa32.39■■■□□ 2.78
SSSCA1-207ENST00000533115 CSH1P0DML2 217 aa32.39■■■□□ 2.78
SSSCA1-207ENST00000533115 CSH2P0DML3 217 aa32.39■■■□□ 2.78
SSSCA1-207ENST00000533115 HMGA1P17096 107 aaKnown RBP32.39■■■□□ 2.78
SSSCA1-207ENST00000533115 MAPRE1Q15691 268 aaKnown RBP32.39■■■□□ 2.78
SSSCA1-207ENST00000533115 DDR2Q16832 855 aa32.39■■■□□ 2.78
SSSCA1-207ENST00000533115 SDHAF4Q5VUM1 108 aa32.39■■■□□ 2.78
SSSCA1-207ENST00000533115 DEPDC1BQ8WUY9 529 aa32.39■■■□□ 2.78
SSSCA1-207ENST00000533115 RMND1Q9NWS8 449 aa32.39■■■□□ 2.78
SSSCA1-207ENST00000533115 CYP4F8P98187 520 aa32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 NCOA4Q13772 614 aa32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 MFSD6LQ8IWD5 586 aa32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 SMYD4Q8IYR2 804 aaPredicted RBP32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 OR6B3Q8NGW1 331 aa32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 DNASE1L2Q92874 299 aa32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 MYLPFQ96A32 169 aa32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 TIGD1Q96MW7 591 aa32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 BRD9Q9H8M2 597 aa32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 MAGEC2Q9UBF1 373 aaPredicted RBP32.38■■■□□ 2.77
SSSCA1-207ENST00000533115 HEPACAM2A8MVW5 462 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 IKBKBO14920 756 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 AKAP3O75969 853 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 VNN1O95497 513 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 RPL13P26373 211 aaKnown RBP32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 MAGEA11P43364 429 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 ZNF699Q32M78 642 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 ARID3BQ8IVW6 561 aaPredicted RBP32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 CCDC105Q8IYK2 499 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 STKLD1Q8NE28 680 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 GSDMAQ96QA5 445 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 DDX23Q9BUQ8 820 aaKnown RBP32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 IRF2BPLQ9H1B7 796 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 TASP1Q9H6P5 420 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 CIZ1Q9ULV3 898 aaPredicted RBP32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 MAGED2Q9UNF1 606 aaPredicted RBP32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 SIT1Q9Y3P8 196 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms