RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 ARMC2Q8NEN0 867 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 APBA2Q99767 749 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 ACTR5Q9H9F9 607 aaPredicted RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 ZMYND10O75800 440 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 PTPRAP18433 802 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 TUFMP49411 452 aaKnown RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 SERPINB9P50453 376 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 EPM2AIP1Q7L775 607 aaPredicted RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 NT5DC4Q86YG4 428 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 RNF135Q8IUD6 432 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 WDR49Q8IV35 697 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 DDIT4Q9NX09 232 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 REREQ9P2R6 1566 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 A0A087WZ62 844 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 STX7O15400 261 aaKnown RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 ARP10275 920 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 PSMD7P51665 324 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 PMS2P54278 862 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 GEMP55040 296 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 SLC18A3Q16572 532 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 SLC27A1Q6PCB7 646 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 CCDC149Q6ZUS6 474 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 C15orf52Q6ZUT6 534 aaKnown RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 KDELC2Q7Z4H8 507 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 DNAJB3Q8WWF6 145 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 FDXACB1Q9BRP7 624 aaPredicted RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 PSD3Q9NYI0 1048 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 C2orf81A6NN90 581 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 NFIBO00712 420 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 EFCAB14O75071 495 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 CAND2O75155 1236 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 SUPT3HO75486 399 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 BRAFP15056 766 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 SESN2P58004 480 aaPredicted RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 ABCE1P61221 599 aaKnown RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 LAMTOR4Q0VGL1 99 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 NCKAP1Q9Y2A7 1128 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 PAX3P23760 479 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 VCPP55072 806 aaKnown RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 ZNF284Q2VY69 593 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 ARMCX6Q7L4S7 300 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 DSG4Q86SJ6 1040 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 DDIASQ8IXT1 998 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 KIAA2013Q8IYS2 634 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 CARNMT1Q8N4J0 409 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 TRIML2Q8N7C3 387 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 TINF2Q9BSI4 451 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 AGPAT3Q9NRZ7 376 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 HEATR9A2RTY3 570 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 LRRIQ3A6PVS8 624 aaPredicted RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 M0QYT0 321 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 WBP4O75554 376 aaKnown RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 RTN3O95197 1032 aaPredicted RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 EPHB2P29323 1055 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 SHMT1P34896 483 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 EFTUD2Q15029 972 aaKnown RBP eCLIP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 OVOS1Q6IE37 1185 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 TMC2Q8TDI7 906 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 KLHL29Q96CT2 875 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 OSBPL9Q96SU4 736 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 ZNF518BQ9C0D4 1074 aa11.19□□□□□ -0.62
COLCA1-203ENST00000532918 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
COLCA1-203ENST00000532918 FAM205CA6NFA0 338 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 CHUKO15111 745 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 SPAG6O75602 509 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 MAPTP10636 758 aaKnown RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 DNAJB2P25686 324 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 NPTX2P47972 431 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 HS6ST3Q8IZP7 471 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 FEZF2Q8TBJ5 459 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 AGAP3Q96P47 875 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 CYTH2Q99418 400 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 FRMD8Q9BZ67 464 aaPredicted RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 FOXP3Q9BZS1 431 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 PPCSQ9HAB8 311 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 RRN3Q9NYV6 651 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 RAB23Q9ULC3 237 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 GHRP10912 638 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 LY6KQ17RY6 165 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 FBXO47Q5MNV8 452 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 ENGASEQ8NFI3 743 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 SLC30A5Q8TAD4 765 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 YIPF3Q9GZM5 350 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 RIOX1Q9H6W3 641 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 AKAP7Q9P0M2 348 aaPredicted RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 ANGPTL2Q9UKU9 493 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 ZNF711Q9Y462 761 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 E2F6O75461 281 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 ATP1A1P05023 1023 aaKnown RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 SLC7A5Q01650 507 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 ZRANB3Q5FWF4 1079 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 IRAK1BP1Q5VVH5 260 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 PIP4K2CQ8TBX8 421 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 CLMNQ96JQ2 1002 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 FRMD8P1Q9BZ68 369 aaPredicted RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 PITPNM3Q9BZ71 974 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 METTL5Q9NRN9 209 aaKnown RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 UTP6Q9NYH9 597 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms