RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 NLRP12P59046 1061 aa18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 TSPY1Q01534 308 aa18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 CCINQ13939 588 aa18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 HEATR6Q6AI08 1181 aaKnown RBP18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 CMTM8Q8IZV2 173 aa18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 GPR161Q8N6U8 529 aaKnown RBP18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 CELF5Q8N6W0 485 aaKnown RBP18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 MAB21L3Q8N8X9 362 aa18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 CXorf38Q8TB03 319 aa18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 RIN3Q8TB24 985 aa18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 NOC3LQ8WTT2 800 aaKnown RBP18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 RAB23Q9ULC3 237 aa18.39■□□□□ 0.53
RPUSD4-207ENST00000532800 FRMD3A2A2Y4 597 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 HRO43593 1189 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 HCRTO43612 131 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 PRPF40AO75400 957 aaKnown RBP18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 PRPF6O94906 941 aaKnown RBP18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 GARTP22102 1010 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 STAT6P42226 847 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 ATXN1P54253 815 aaKnown RBP18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 PLCB2Q00722 1185 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 SPEM2Q0P670 501 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 BFSP1Q12934 665 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 ITPRIPL2Q3MIP1 535 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 DGKKQ5KSL6 1271 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 TXNDC8Q6A555 127 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 TRIM68Q6AZZ1 485 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 LAIR1Q6GTX8 287 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 CCDC73Q6ZRK6 1079 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 OSTM1Q86WC4 334 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 SYCP3Q8IZU3 236 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 USP13Q92995 863 aaPredicted RBP18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 PCIF1Q9H4Z3 704 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 PDE11AQ9HCR9 933 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 HPS4Q9NQG7 708 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 GKN1Q9NS71 199 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 DDX43Q9NXZ2 648 aaKnown RBP18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 SIX4Q9UIU6 781 aa18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 MAGED2Q9UNF1 606 aaPredicted RBP18.38■□□□□ 0.53
RPUSD4-207ENST00000532800 TADA3O75528 432 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 PAPSS2O95340 614 aaPredicted RBP18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 LMNB2Q03252 620 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 SIM2Q14190 667 aaPredicted RBP18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 DDR2Q16832 855 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 INTS6LQ5JSJ4 861 aaKnown RBP18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 LMBRD2Q68DH5 695 aaPredicted RBP18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 PKN3Q6P5Z2 889 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 CSGALNACT2Q8N6G5 542 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 GLIS3Q8NEA6 775 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 LEO1Q8WVC0 666 aaPredicted RBP18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 CHFRQ96EP1 664 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 PKMYT1Q99640 499 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 FAM83CQ9BQN1 747 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 MTMR12Q9C0I1 747 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 PANK4Q9NVE7 773 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 THG1LQ9NWX6 298 aaKnown RBP18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 MTMR6Q9Y217 621 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 PCDHB13Q9Y5F0 798 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 ATG2BQ96BY7 2078 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 SPTBN2O15020 2390 aa18.37■□□□□ 0.53
RPUSD4-207ENST00000532800 OTOL1A6NHN0 477 aaPredicted RBP18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 EXTL3O43909 919 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 HUS1O60921 280 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 LDHAP00338 332 aaKnown RBP18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 KRT19P08727 400 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 CSH1P0DML2 217 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 CSH2P0DML3 217 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 CYP2F1P24903 491 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 AVPR1AP37288 418 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 PTPRJQ12913 1337 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 NFE2Q16621 373 aaPredicted RBP18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 LONP2Q86WA8 852 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 LRRC52Q8N7C0 313 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 PDILTQ8N807 584 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 CACTINQ8WUQ7 758 aaKnown RBP18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 HPS3Q969F9 1004 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 ACBD6Q9BR61 282 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 EBF3Q9H4W6 596 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 GTF3C4Q9UKN8 822 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 ITGA11Q9UKX5 1188 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 CDV3Q9UKY7 258 aaKnown RBP18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 SNX9Q9Y5X1 595 aa18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.36■□□□□ 0.53
RPUSD4-207ENST00000532800 RALGAPA1Q6GYQ0 2036 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 PRR5-ARHGAP8B1AHC4 643 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 ARSAP15289 507 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 DDX6P26196 483 aaKnown RBP eCLIP18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 ARHGAP8P85298 464 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 MYL7Q01449 175 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 ALCAMQ13740 583 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 RUNX3Q13761 415 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 SLC39A14Q15043 492 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 FSTL4Q6MZW2 842 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 ADGRF2Q8IZF7 708 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 TMEM86AQ8N2M4 240 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 MRPS31Q92665 395 aaKnown RBP18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 TDP1Q9NUW8 608 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 GDAP2Q9NXN4 497 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 ZMYM5Q9UJ78 669 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms