RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 CSH1P0DML2 217 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 CSH2P0DML3 217 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 PCSK1P29120 753 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 PLCB2Q00722 1185 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 INTS6LQ5JSJ4 861 aaKnown RBP23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 FAM26FQ5R3K3 315 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 SCARA3Q6AZY7 606 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 CNNM4Q6P4Q7 775 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 MAMSTRQ6ZN01 415 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 ADGRF2Q8IZF7 708 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 CELF5Q8N6W0 485 aaKnown RBP23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 ZBTB44Q8NCP5 570 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 TTC8Q8TAM2 541 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 ZNF507Q8TCN5 953 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 LEO1Q8WVC0 666 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 HPDLQ96IR7 371 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 ZFYVE19Q96K21 471 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 FAM126AQ9BYI3 521 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 MAGEF1Q9HAY2 307 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 ABCB6Q9NP58 842 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 PRMT8Q9NR22 394 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 FAM13BQ9NYF5 915 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 GTF3C4Q9UKN8 822 aa23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 MAGED2Q9UNF1 606 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC4-210ENST00000531290 PRAMEF12O95522 483 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 CHRNB1P11230 501 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 HMGA1P17096 107 aaKnown RBP23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 HOXD13P35453 343 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 AVPR1AP37288 418 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 ID4P47928 161 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 ME1P48163 572 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 SOX9P48436 509 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 NRLP54845 237 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 NLRP12P59046 1061 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 LRRC32Q14392 662 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 DPH6Q7L8W6 267 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 RALGPS2Q86X27 583 aaPredicted RBP23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 SPATA2LQ8IUW3 424 aaPredicted RBP23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 CMTM8Q8IZV2 173 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 SUMF1Q8NBK3 374 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 OR5B17Q8NGF7 314 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 MRPS31Q92665 395 aaKnown RBP23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 SMG9Q9H0W8 520 aaKnown RBP23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 GTSE1Q9NYZ3 720 aa23.91■■□□□ 1.42
TRAPPC4-210ENST00000531290 MYBPHLA2RUH7 354 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 SPECC1L-ADORA2AF8WAN1 911 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 F13A1P00488 732 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 F11P03951 625 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 CYP2F1P24903 491 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 DDX6P26196 483 aaKnown RBP eCLIP23.9■■□□□ 1.423e-7■□□□□ 9.5
TRAPPC4-210ENST00000531290 GPR15P49685 360 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 CCR3P51677 355 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 DDR2Q16832 855 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 SOWAHAQ2M3V2 549 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 ATL3Q6DD88 541 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 EPM2AIP1Q7L775 607 aaPredicted RBP23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 KIAA2013Q8IYS2 634 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 MAB21L3Q8N8X9 362 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 RDH13Q8NBN7 331 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 NELL1Q92832 810 aa23.9■■□□□ 1.42
TRAPPC4-210ENST00000531290 FAM186AA6NE01 2351 aa23.89■■□□□ 1.42
TRAPPC4-210ENST00000531290 GABRDO14764 452 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 CXCL12P48061 93 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 SNRPFP62306 86 aaKnown RBP23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 SDHAF4Q5VUM1 108 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 UNC13DQ70J99 1090 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 HS2ST1Q7LGA3 356 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 OSTM1Q86WC4 334 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 WDR49Q8IV35 697 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 FNBP1Q96RU3 617 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 AGPAT3Q9NRZ7 376 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 UXTQ9UBK9 157 aaPredicted RBP23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 CFAP45Q9UL16 551 aa23.89■■□□□ 1.41
TRAPPC4-210ENST00000531290 PTPRJQ12913 1337 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 SOBPA7XYQ1 873 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 TNNI1P19237 187 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 CTHP32929 405 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 SNRNP35Q16560 246 aaKnown RBP23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 DGKKQ5KSL6 1271 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 TMEM150AQ86TG1 271 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 NELFCDQ8IXH7 590 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 DCLK2Q8N568 766 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 SECISBP2LQ93073 1101 aaKnown RBP23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 PKMYT1Q99640 499 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 BLZF1Q9H2G9 400 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 GKN1Q9NS71 199 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 NCDNQ9UBB6 729 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 PCDHA7Q9UN72 937 aa23.88■■□□□ 1.41
TRAPPC4-210ENST00000531290 UBE4BO95155 1302 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 CLIC2O15247 247 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 TGFB1I1O43294 461 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 LILRB5O75023 590 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 DLATP10515 647 aaKnown RBP23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 CYP2J2P51589 502 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 FOXK2Q01167 660 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 TNK2Q07912 1038 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 ITPRIPL2Q3MIP1 535 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 CFAP221Q4G0U5 840 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 TXNDC8Q6A555 127 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms