RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 C11orf74Q86VG3 221 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 PPP4R1Q8TF05 950 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 RAD54LQ92698 747 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 FAM89AQ96GI7 184 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 CYTH2Q99418 400 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 CCDC106Q9BWC9 280 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 DNAJC18Q9H819 358 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 MANSC1Q9H8J5 431 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 PSTPIP2Q9H939 334 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 VTA1Q9NP79 307 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 FBXO6Q9NRD1 293 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 H3BRJ5 948 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 PFDN6O15212 129 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 ALOX15BO15296 676 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 FAM58BPP0C7Q3 252 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 RBP3P10745 1247 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 HSPA8P11142 646 aaKnown RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 FXR2P51116 673 aaKnown RBP eCLIP8.52□□□□□ -1.055e-7■□□□□ 10.4
CSDE1-214ENST00000530886 Q3C1V9 767 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 AADACL2Q6P093 401 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 CYP2U1Q7Z449 544 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 PCYOX1LQ8NBM8 494 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 SDR42E1Q8WUS8 393 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 TRIM11Q96F44 468 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 OTUD5Q96G74 571 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 LBHD1Q9BQE6 289 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 INO80BQ9C086 356 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 CCDC68Q9H2F9 335 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 DTNAQ9Y4J8 743 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 A0A0G2JND7 137 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 TRIM64CA6NLI5 447 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 IRS4O14654 1257 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 ATMINO43313 823 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 TIMM44O43615 452 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 SLC9A1P19634 815 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 ENDOUP21128 410 aaKnown RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 STAT1P42224 750 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 GSSP48637 474 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 HNRNPFP52597 415 aaKnown RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 ARL4CP56559 192 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 FAM209AQ5JX71 171 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 RNF207Q6ZRF8 634 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 PLEKHA8Q96JA3 519 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 CCDC85AQ96PX6 553 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 NUDT12Q9BQG2 462 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 BRIP1Q9BX63 1249 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 TSSK1BQ9BXA7 367 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 IL17RBQ9NRM6 502 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 GID8Q9NWU2 228 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.52□□□□□ -1.054e-7■■■□□ 19.2
CSDE1-214ENST00000530886 NCKIPSDQ9NZQ3 722 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 DCTN4Q9UJW0 460 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 CNOT11Q9UKZ1 510 aaKnown RBP8.52□□□□□ -1.05
CSDE1-214ENST00000530886 PPME1Q9Y570 386 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 MAD1L1Q9Y6D9 718 aa8.52□□□□□ -1.05
CSDE1-214ENST00000530886 SF3B1O75533 1304 aaKnown RBP eCLIP8.51□□□□□ -1.051e-6■■■■■ 28.6
CSDE1-214ENST00000530886 H0YJX3 145 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 AQP9O43315 295 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 ACTN1P12814 892 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 SLC5A1P13866 664 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 EIF2B2P49770 351 aaKnown RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 CTSWP56202 376 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 ZBTB16Q05516 673 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 SEPT6Q14141 434 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 E2F2Q14209 437 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 HIC1Q14526 733 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 PKN2Q16513 984 aaKnown RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 METTL24Q5JXM2 366 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 SPTY2D1Q68D10 685 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 KBTBD6Q86V97 674 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 BPHLQ86WA6 291 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 RTKN2Q8IZC4 609 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 ZCCHC9Q8N567 271 aaKnown RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 CCDC89Q8N998 374 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 KRT35Q92764 455 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 ARHGEF26Q96DR7 871 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 DCUN1D1Q96GG9 259 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 THTPAQ9BU02 230 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 NMUR2Q9GZQ4 415 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 ANAPC5Q9UJX4 755 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 ASTN2O75129 1339 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 CYP2D7A0A087X1C5 515 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 EXOC1LA0A1B0GW35 172 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 RSL1D1O76021 490 aaKnown RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 CRTAMO95727 393 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 AOC1P19801 751 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 SOX5P35711 763 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 COASYQ13057 564 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 PUM3Q15397 648 aaKnown RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 TMEM214Q6NUQ4 689 aaKnown RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 ZNF804AQ7Z570 1209 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 CPSF7Q8N684 471 aaKnown RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 FBXO27Q8NI29 283 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 USP33Q8TEY7 942 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 GPKOWQ92917 476 aaPredicted RBP eCLIP8.51□□□□□ -1.051e-7■□□□□ 10.5
CSDE1-214ENST00000530886 ZNF641Q96N77 438 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-214ENST00000530886 MXD3Q9BW11 206 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 RETREG1Q9H6L5 497 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 BARHL2Q9NY43 387 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms