RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 RPL10AP62906 217 aaKnown RBP8.83□□□□□ -1
CTNND1-225ENST00000530094 HPCAP84074 193 aa8.83□□□□□ -1
CTNND1-225ENST00000530094 C16orf89Q6UX73 402 aa8.83□□□□□ -1
CTNND1-225ENST00000530094 SETD3Q86TU7 594 aaPredicted RBP8.83□□□□□ -1
CTNND1-225ENST00000530094 SYTL5Q8TDW5 730 aaPredicted RBP8.83□□□□□ -1
CTNND1-225ENST00000530094 C1orf54Q8WWF1 131 aa8.83□□□□□ -1
CTNND1-225ENST00000530094 YIPF2Q9BWQ6 316 aa8.83□□□□□ -1
CTNND1-225ENST00000530094 SLC13A1Q9BZW2 595 aa8.83□□□□□ -1
CTNND1-225ENST00000530094 SYNDIG1Q9H7V2 258 aa8.83□□□□□ -1
CTNND1-225ENST00000530094 SLC25A13Q9UJS0 675 aa8.83□□□□□ -1
CTNND1-225ENST00000530094 XRN1Q8IZH2 1706 aaKnown RBP8.83□□□□□ -1
CTNND1-225ENST00000530094 GAKO14976 1311 aa8.83□□□□□ -1
CTNND1-225ENST00000530094 SLIT2O94813 1529 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 ALDH1A2O94788 518 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 NPTXRO95502 500 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 FAM107AO95990 144 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 HLA-DRAP01903 254 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 MYL2P10916 166 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 ETFBP38117 255 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 DPYDQ12882 1025 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 PREPLQ4J6C6 727 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 CYP4A22Q5TCH4 519 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 ADCK2Q7Z695 626 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 CDR2LQ86X02 465 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 PCYOX1LQ8NBM8 494 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 SMYD3Q9H7B4 428 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 ZNF556Q9HAH1 456 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 MPP6Q9NZW5 540 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 FDPSP14324 419 aaKnown RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 GEMP55040 296 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 POLD3Q15054 466 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 NAB2Q15742 525 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 PHKG1Q16816 387 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 TIGD7Q6NT04 549 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 SEPT8Q92599 483 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 TMEM169Q96HH4 297 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 DACH2Q96NX9 599 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 OLFM3Q96PB7 478 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 DDX47Q9H0S4 455 aaKnown RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 ZC3H7BQ9UGR2 993 aaKnown RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 SLC37A4O43826 429 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 PQBP1O60828 265 aaKnown RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 F9P00740 461 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 TMEM253P0C7T8 217 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 ZNF286BP0CG31 522 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 SERPINB10P48595 397 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 INHBEP58166 350 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 DNAL1Q4LDG9 190 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 C10orf120Q5SQS8 335 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 BEND6Q5SZJ8 279 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 FAM47EQ6ZV65 393 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 CHSY1Q86X52 802 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 FAM9CQ8IZT9 166 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 SLC35G2Q8TBE7 412 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 COG1Q8WTW3 980 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 TADA1Q96BN2 335 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 SPATA17Q96L03 361 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 GPR63Q9BZJ6 419 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 KRCC1Q9NPI7 259 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 CD274Q9NZQ7 290 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 XPO7Q9UIA9 1087 aaKnown RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 YDJCA8MPS7 323 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 STRNO43815 780 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 FBXO21O94952 628 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 IRF1P10914 325 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 ATICP31939 592 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 ELAVL2Q12926 359 aaKnown RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 ZNF177Q13360 481 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 USP10Q14694 798 aaKnown RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 SEC23AQ15436 765 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 LY6KQ17RY6 165 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 AASDHQ4L235 1098 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 PPP4R4Q6NUP7 873 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 SLC30A10Q6XR72 485 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 SHCBP1Q8NEM2 672 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 SOCS4Q8WXH5 440 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 RIN2Q8WYP3 895 aaPredicted RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 PABPC5Q96DU9 382 aaKnown RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 HPDLQ96IR7 371 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 MCEEQ96PE7 176 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 TRABDQ9H4I3 376 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 KLHL11Q9NVR0 708 aa8.82□□□□□ -1
CTNND1-225ENST00000530094 UTP6Q9NYH9 597 aaKnown RBP8.82□□□□□ -1
CTNND1-225ENST00000530094 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.82□□□□□ -13e-9■□□□□ 10.4
CTNND1-225ENST00000530094 C16orf96A6NNT2 1141 aa8.81□□□□□ -1
CTNND1-225ENST00000530094 ZSCAN9O15535 394 aaPredicted RBP8.81□□□□□ -1
CTNND1-225ENST00000530094 CTDNEP1O95476 244 aa8.81□□□□□ -1
CTNND1-225ENST00000530094 SESN2P58004 480 aaPredicted RBP8.81□□□□□ -1
CTNND1-225ENST00000530094 ZNF200P98182 395 aaPredicted RBP8.81□□□□□ -1
CTNND1-225ENST00000530094 CNTN2Q02246 1040 aa8.81□□□□□ -1
CTNND1-225ENST00000530094 BYSLQ13895 437 aaKnown RBP8.81□□□□□ -1
CTNND1-225ENST00000530094 BOLA3Q53S33 107 aa8.81□□□□□ -1
CTNND1-225ENST00000530094 CCNJLQ8IV13 435 aa8.81□□□□□ -1
CTNND1-225ENST00000530094 TRIM48Q8IWZ4 208 aa8.81□□□□□ -1
CTNND1-225ENST00000530094 MRPL1Q9BYD6 325 aaKnown RBP8.81□□□□□ -1
CTNND1-225ENST00000530094 HMX1Q9NP08 348 aaPredicted RBP8.81□□□□□ -1
CTNND1-225ENST00000530094 LATS2Q9NRM7 1088 aa8.81□□□□□ -1
CTNND1-225ENST00000530094 GID8Q9NWU2 228 aa8.81□□□□□ -1
CTNND1-225ENST00000530094 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms