RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 CCSER1Q9C0I3 900 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 DUSP15Q9H1R2 295 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-216ENST00000529928 PARVGQ9HBI0 331 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 PCDHB5Q9Y5E4 795 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 VWA3AA6NCI4 1184 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 TRAK2O60296 914 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 PROS1P07225 676 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 CSH1P0DML2 217 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 CSH2P0DML3 217 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 ARSAP15289 507 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 ANK1P16157 1881 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 HMGA1P17096 107 aaKnown RBP17.34■□□□□ 0.37
COL16A1-216ENST00000529928 GALK1P51570 392 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 EML5Q05BV3 1969 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 ZNF268Q14587 947 aaPredicted RBP17.34■□□□□ 0.37
COL16A1-216ENST00000529928 WSCD1Q658N2 575 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 TXNDC8Q6A555 127 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 TCEAL6Q6IPX3 200 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 SLC39A4Q6P5W5 647 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 MON1AQ86VX9 555 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 CPA6Q8N4T0 437 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 TCEAL3Q969E4 200 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 ACDQ96AP0 544 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 FBRSL1Q9HCM7 1045 aaKnown RBP17.34■□□□□ 0.37
COL16A1-216ENST00000529928 DPP3Q9NY33 737 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 EBF1Q9UH73 591 aa17.34■□□□□ 0.37
COL16A1-216ENST00000529928 SLC26A4O43511 780 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 FAM13AO94988 1023 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 APBB3O95704 486 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 CAVIN2O95810 425 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 GJA4P35212 333 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 ACOT2P49753 483 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 NOVA1P51513 510 aaKnown RBP17.33■□□□□ 0.36
COL16A1-216ENST00000529928 ZNF131P52739 623 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 CREB5Q02930 508 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 DAB2IPQ5VWQ8 1189 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 ARL6IP4Q66PJ3 421 aaKnown RBP17.33■□□□□ 0.36
COL16A1-216ENST00000529928 GPBP1Q86WP2 473 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 RPLP0P6Q8NHW5 317 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 POLR3BQ9NW08 1133 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-216ENST00000529928 UXTQ9UBK9 157 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-216ENST00000529928 MAGED2Q9UNF1 606 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-216ENST00000529928 KIF3AQ9Y496 699 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 DENND4CQ5VZ89 1909 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 CHD6Q8TD26 2715 aa17.33■□□□□ 0.36
COL16A1-216ENST00000529928 BCLAF3A2AJT9 711 aaKnown RBP17.32■□□□□ 0.36
COL16A1-216ENST00000529928 KPNA7A9QM74 516 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 GTF2BQ00403 316 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 TSPY1Q01534 308 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 POU5F1Q01860 360 aaKnown RBP17.32■□□□□ 0.36
COL16A1-216ENST00000529928 DMC1Q14565 340 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 MTF1Q14872 753 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 NFE2Q16621 373 aaPredicted RBP17.32■□□□□ 0.36
COL16A1-216ENST00000529928 SV2CQ496J9 727 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 ADALQ6DHV7 355 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 SLFN12LQ6IEE8 588 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 C11orf74Q86VG3 221 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 CCDC26Q8TAB7 109 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 RIN3Q8TB24 985 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 CD101Q93033 1021 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 AK8Q96MA6 479 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 ECT2Q9H8V3 914 aa17.32■□□□□ 0.36
COL16A1-216ENST00000529928 SCN1AP35498 2009 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 C4orf47A7E2U8 309 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 DCLK1O15075 740 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 PRPF40AO75400 957 aaKnown RBP17.31■□□□□ 0.36
COL16A1-216ENST00000529928 FAM160A1Q05DH4 1040 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 MCTP1Q6DN14 999 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 UNQ6494/PRO21346Q6UXR6 183 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 LEO1Q8WVC0 666 aaPredicted RBP17.31■□□□□ 0.36
COL16A1-216ENST00000529928 OSCP1Q8WVF1 389 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 ATP2A3Q93084 1043 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 CALML4Q96GE6 196 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 ZNF560Q96MR9 790 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 PI4K2AQ9BTU6 479 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 TMEM206Q9H813 350 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 DUS2Q9NX74 493 aaKnown RBP17.31■□□□□ 0.36
COL16A1-216ENST00000529928 AGO2Q9UKV8 859 aaKnown RBP17.31■□□□□ 0.36
COL16A1-216ENST00000529928 OBSL1O75147 1896 aa17.31■□□□□ 0.36
COL16A1-216ENST00000529928 ZNF638Q14966 1978 aaKnown RBP17.3■□□□□ 0.36
COL16A1-216ENST00000529928 TCHHQ07283 1943 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 LNP1A1A4G5 178 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 ANKRD63C9JTQ0 380 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 TBCAO75347 108 aaKnown RBP17.3■□□□□ 0.36
COL16A1-216ENST00000529928 KRT18P05783 430 aaKnown RBP17.3■□□□□ 0.36
COL16A1-216ENST00000529928 USP17L7P0C7H9 530 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 GBP1P32455 592 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 PNPLA4P41247 253 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 DGKEP52429 567 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 RPL10AP62906 217 aaKnown RBP17.3■□□□□ 0.36
COL16A1-216ENST00000529928 PSMD2Q13200 908 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 DHX8Q14562 1220 aaKnown RBP17.3■□□□□ 0.36
COL16A1-216ENST00000529928 NAIF1Q69YI7 327 aaPredicted RBP17.3■□□□□ 0.36
COL16A1-216ENST00000529928 NT5DC4Q86YG4 428 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 EZH1Q92800 747 aaPredicted RBP17.3■□□□□ 0.36
COL16A1-216ENST00000529928 TRMT2BQ96GJ1 504 aaKnown RBP17.3■□□□□ 0.36
COL16A1-216ENST00000529928 MYRFLQ96LU7 910 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 FIZ1Q96SL8 496 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 ZHX3Q9H4I2 956 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 ABCB6Q9NP58 842 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms