RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ANO7Q6IWH7 933 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 GIPC2Q8TF65 315 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 OSCP1Q8WVF1 389 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 SPACA7Q96KW9 195 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 KIF2CQ99661 725 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 RUSC1Q9BVN2 902 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 TPSD1Q9BZJ3 242 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
COPB1-207ENST00000529866 FBRSL1Q9HCM7 1045 aaKnown RBP11.28□□□□□ -0.6
COPB1-207ENST00000529866 DUS2Q9NX74 493 aaKnown RBP11.28□□□□□ -0.6
COPB1-207ENST00000529866 ABI2Q9NYB9 513 aaPredicted RBP11.28□□□□□ -0.6
COPB1-207ENST00000529866 INVSQ9Y283 1065 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 AKAP13Q12802 2813 aa11.27□□□□□ -0.6
COPB1-207ENST00000529866 TNFRSF10BO14763 440 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 CYP11A1P05108 521 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 CSH1P0DML2 217 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 CSH2P0DML3 217 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 MAPTP10636 758 aaKnown RBP11.27□□□□□ -0.61
COPB1-207ENST00000529866 HAPLN1P10915 354 aaPredicted RBP11.27□□□□□ -0.61
COPB1-207ENST00000529866 PLS3P13797 630 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 GUCY2CP25092 1073 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 NMT1P30419 496 aaKnown RBP11.27□□□□□ -0.61
COPB1-207ENST00000529866 MAPK8P45983 427 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 GUCY2FP51841 1108 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 MAPK7Q13164 816 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 SPATA1Q5VX52 437 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 NAIF1Q69YI7 327 aaPredicted RBP11.27□□□□□ -0.61
COPB1-207ENST00000529866 TXNDC8Q6A555 127 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 RINT1Q6NUQ1 792 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 MON1AQ86VX9 555 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 RASSF3Q86WH2 238 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 CCDC83Q8IWF9 413 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 CD302Q8IX05 232 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 DCP1BQ8IZD4 617 aaKnown RBP11.27□□□□□ -0.61
COPB1-207ENST00000529866 HDDC3Q8N4P3 179 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 TMEM161BQ8NDZ6 487 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 NTPCRQ9BSD7 190 aaKnown RBP11.27□□□□□ -0.61
COPB1-207ENST00000529866 UXTQ9UBK9 157 aaPredicted RBP11.27□□□□□ -0.61
COPB1-207ENST00000529866 KLK13Q9UKR3 277 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
COPB1-207ENST00000529866 FREM2Q5SZK8 3169 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 LAMA5O15230 3695 aa11.27□□□□□ -0.61
COPB1-207ENST00000529866 PDCD11Q14690 1871 aaKnown RBP11.26□□□□□ -0.61
COPB1-207ENST00000529866 LACTBL1A8MY62 500 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 UPK3BL1B0FP48 263 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 UPK3BL2E5RIL1 263 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 E9PMD0 336 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
COPB1-207ENST00000529866 F11P03951 625 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 ENGP17813 658 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 BCKDHBP21953 392 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 HOXD12P35452 270 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 TRAPPC10P48553 1259 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 LIG4P49917 911 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
COPB1-207ENST00000529866 PDIA5Q14554 519 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 ZNF423Q2M1K9 1284 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 C9orf57Q5W0N0 161 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 C1orf186Q6ZWK4 172 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 TMEM150AQ86TG1 271 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 TTC30AQ86WT1 665 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 PROSER1Q86XN7 944 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 SYT12Q8IV01 421 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 TMEM130Q8N3G9 435 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 TTC16Q8NEE8 873 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 MDGA1Q8NFP4 955 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 WHAMMQ8TF30 809 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 FAM212AQ96EL1 285 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 FOXP1Q9H334 677 aaPredicted RBP11.26□□□□□ -0.61
COPB1-207ENST00000529866 TMEM206Q9H813 350 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 NOL7Q9UMY1 257 aaKnown RBP11.26□□□□□ -0.61
COPB1-207ENST00000529866 MAGED2Q9UNF1 606 aaPredicted RBP11.26□□□□□ -0.61
COPB1-207ENST00000529866 PCDHB5Q9Y5E4 795 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 SETXQ7Z333 2677 aaKnown RBP11.26□□□□□ -0.61
COPB1-207ENST00000529866 ITPR1Q14643 2758 aa11.26□□□□□ -0.61
COPB1-207ENST00000529866 NUP210Q8TEM1 1887 aaPredicted RBP11.25□□□□□ -0.61
COPB1-207ENST00000529866 TRAV19A0A0A6YYK7 116 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 SPAARA0A1B0GVQ0 90 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 SFI1A8K8P3 1242 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 CYB561D2O14569 222 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 PPEF2O14830 753 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 OGTO15294 1046 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 MAP3K13O43283 966 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 NFATC1O95644 943 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 CKMP06732 381 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 USP17L7P0C7H9 530 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 HMGA1P17096 107 aaKnown RBP11.25□□□□□ -0.61
COPB1-207ENST00000529866 SCP2P22307 547 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 TNFSF9P41273 254 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 TAF6P49848 677 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 SEC13P55735 322 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 TSPY1Q01534 308 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 USP4Q13107 963 aa11.25□□□□□ -0.61
COPB1-207ENST00000529866 BYSLQ13895 437 aaKnown RBP11.25□□□□□ -0.61
COPB1-207ENST00000529866 HNRNPDQ14103 355 aaKnown RBP11.25□□□□□ -0.61
COPB1-207ENST00000529866 NBR1Q14596 966 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms