RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PTPRDP23468 1912 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 TRIOO75962 3097 aa12.97□□□□□ -0.33
TRAPPC4-209ENST00000528230 GREB1Q4ZG55 1949 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 MYBPHLA2RUH7 354 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 SOBPA7XYQ1 873 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 SOAT2O75908 522 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 CFHP08603 1231 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 NPR3P17342 541 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 ATF6P18850 670 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 ACAT1P24752 427 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 LMO2P25791 158 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 WEE1P30291 646 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 PSMC2P35998 433 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 GNL1P36915 607 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 MAGEA11P43364 429 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 VAMP7P51809 220 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 GPC5P78333 572 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 PFKPQ01813 784 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 BIRC3Q13489 604 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 NCOA4Q13772 614 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 TEAD2Q15562 447 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 TAF12Q16514 161 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 SGSM1Q2NKQ1 1148 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 ZACNQ401N2 412 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 FAM78AQ5JUQ0 283 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 TANGO2Q6ICL3 276 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 INTS8Q75QN2 995 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 SIX5Q8N196 739 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 GPR152Q8TDT2 470 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 TAF4BQ92750 862 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 SMARCE1Q969G3 411 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 ZSWIM3Q96MP5 696 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 LPIN3Q9BQK8 851 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 SYT15Q9BQS2 421 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 PI4K2AQ9BTU6 479 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 MKNK1Q9BUB5 465 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 SNX25Q9H3E2 840 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
TRAPPC4-209ENST00000528230 NUP210Q8TEM1 1887 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 ZNF638Q14966 1978 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 A0A1W2PRU2 124 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 KRBA1A5PL33 1030 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 KINO60870 393 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 AKAP3O75969 853 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 CSH1P0DML2 217 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 CSH2P0DML3 217 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 KRT13P13646 458 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 GJA1P17302 382 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 FCARP24071 287 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 CYP2F1P24903 491 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 GABRR2P28476 465 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 CDC25CP30307 473 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 PRCPP42785 496 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 VCPP55072 806 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 DLG4P78352 724 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 ARHGAP15Q53QZ3 475 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 ZNF667Q5HYK9 610 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 PHLDB3Q6NSJ2 640 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 VSTM1Q6UX27 236 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 GAREM2Q75VX8 874 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 SPATA2LQ8IUW3 424 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 FAM186BQ8IYM0 893 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 ST13P5Q8NFI4 369 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 ZSCAN18Q8TBC5 510 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 MYCBPAPQ8TBZ2 947 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 SHDQ96IW2 340 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 KXD1Q9BQD3 176 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 MRPL45Q9BRJ2 306 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 PLA2G2FQ9BZM2 168 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 ATXN3LQ9H3M9 355 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 IL21Q9HBE4 155 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 ZNF334Q9HCZ1 680 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 MAGEC2Q9UBF1 373 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 OBSL1O75147 1896 aa12.95□□□□□ -0.34
TRAPPC4-209ENST00000528230 NRG2O14511 850 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 CETN3O15182 167 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 ATP2C2O75185 946 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 VNN1O95497 513 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 PDGFRBP09619 1106 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 P4HA1P13674 534 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 HMGA1P17096 107 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 AOC1P19801 751 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 GTF2H1P32780 548 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 PPP1R2P41236 205 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 STARD6P59095 220 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 PRKCQQ04759 706 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 C1orf220Q5T0J3 134 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 SMYD4Q8IYR2 804 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 OR6B3Q8NGW1 331 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 GIPC2Q8TF65 315 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 DEPDC1BQ8WUY9 529 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 MYRFLQ96LU7 910 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 GCNAQ96QF7 691 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 TSG101Q99816 390 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 TRMT61BQ9BVS5 477 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms