RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ZMYM5Q9UJ78 669 aa24.07■■□□□ 1.44
TRAPPC4-208ENST00000527680 ITGA11Q9UKX5 1188 aa24.07■■□□□ 1.44
TRAPPC4-208ENST00000527680 SNX9Q9Y5X1 595 aa24.07■■□□□ 1.44
TRAPPC4-208ENST00000527680 COL4A2P08572 1712 aa24.07■■□□□ 1.44
TRAPPC4-208ENST00000527680 ZNF638Q14966 1978 aaKnown RBP24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 STX6O43752 255 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 ACAT1P24752 427 aaKnown RBP24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 RSPO4Q2I0M5 234 aaPredicted RBP24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 ITPRIPL2Q3MIP1 535 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 TXNDC11Q6PKC3 985 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 PRR23BQ6ZRT6 265 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 TMEM86AQ8N2M4 240 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 LRRC52Q8N7C0 313 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 FGFBP2Q9BYJ0 223 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 LRRC27Q9C0I9 530 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 USP18Q9UMW8 372 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 L1RE1Q9UN81 338 aa24.06■■□□□ 1.44
TRAPPC4-208ENST00000527680 NUP210Q8TEM1 1887 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 CSH1P0DML2 217 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 CSH2P0DML3 217 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 GPR15P49685 360 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 NLRP12P59046 1061 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 RPL10AP62906 217 aaKnown RBP24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 GAS6Q14393 721 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 DDR2Q16832 855 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 SDHAF4Q5VUM1 108 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 GPD1LQ8N335 351 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 MRPS31Q92665 395 aaKnown RBP24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 ANKRD36BP1Q96IX9 119 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 FAM84AQ96KN4 292 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 TFIP11Q9UBB9 837 aaKnown RBP24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 GTF3C4Q9UKN8 822 aa24.05■■□□□ 1.44
TRAPPC4-208ENST00000527680 FRYLO94915 3013 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 FRMD3A2A2Y4 597 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 F11P03951 625 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 TDGF1P13385 188 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 HMGA1P17096 107 aaKnown RBP24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 CYP2F1P24903 491 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 LHX1P48742 406 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 TXNDC8Q6A555 127 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 HEATR6Q6AI08 1181 aaKnown RBP24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 CC2D1AQ6P1N0 951 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 Q6ZS52 159 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 STKLD1Q8NE28 680 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 MTMR12Q9C0I1 747 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 TDP1Q9NUW8 608 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 MORC2Q9Y6X9 1032 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 DCHS1Q96JQ0 3298 aa24.04■■□□□ 1.44
TRAPPC4-208ENST00000527680 ZNF233A6NK53 670 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 CHURC1-FNTBB4DL54 471 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 KIAA0391O15091 583 aaKnown RBP24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 TNNC2P02585 160 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 DDX6P26196 483 aaKnown RBP eCLIP24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 FNTBP49356 437 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 AMPD3Q01432 767 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 MYO1EQ12965 1108 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 SIM2Q14190 667 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 INTS6LQ5JSJ4 861 aaKnown RBP24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 LMBRD2Q68DH5 695 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 SCARA3Q6AZY7 606 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 SPATA2LQ8IUW3 424 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 ADGRF2Q8IZF7 708 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 TTC16Q8NEE8 873 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 HPS3Q969F9 1004 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 ZNF396Q96N95 335 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 GDAP2Q9NXN4 497 aa24.03■■□□□ 1.44
TRAPPC4-208ENST00000527680 K7ELQ4 463 aaPredicted RBP24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 SPTLC2O15270 562 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 SDHBP21912 280 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 PCSK1P29120 753 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 NASPP49321 788 aaPredicted RBP24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 RUNX3Q13761 415 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 SURF1Q15526 300 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 TMEM150AQ86TG1 271 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 SCN4BQ8IWT1 228 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 TOP6BLQ8N6T0 577 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 LINC00301Q8NCQ3 95 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 TNMDQ9H2S6 317 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 EBF3Q9H4W6 596 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 UXTQ9UBK9 157 aaPredicted RBP24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 CCL26Q9Y258 94 aa24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 KIF26AQ9ULI4 1882 aaPredicted RBP24.02■■□□□ 1.44
TRAPPC4-208ENST00000527680 DUOXA2Q1HG44 320 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 MON1AQ86VX9 555 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 OSTM1Q86WC4 334 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 SYNPOQ8N3V7 929 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 LEO1Q8WVC0 666 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 USP13Q92995 863 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 DHX58Q96C10 678 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 HPDLQ96IR7 371 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 TRPC7Q9HCX4 862 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 ABCB6Q9NP58 842 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 INTS13Q9NVM9 706 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 DLL3Q9NYJ7 618 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 SIX4Q9UIU6 781 aa24.01■■□□□ 1.43
TRAPPC4-208ENST00000527680 PRR5-ARHGAP8B1AHC4 643 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 ASIC1P78348 528 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 ARHGAP8P85298 464 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 AMPD2Q01433 879 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 LMNB2Q03252 620 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms