RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 LRRN2O75325 713 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 MYL1P05976 194 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 C12orf56Q8IXR9 622 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 SPATA18Q8TC71 538 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 DEPDC1BQ8WUY9 529 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 IRF7Q92985 503 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 E2F7Q96AV8 911 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 TRPV4Q9HBA0 871 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 HEBP1Q9NRV9 189 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 FAM170BA6NMN3 283 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 ZNF263O14978 683 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 HCRTO43612 131 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 RPN1P04843 607 aaKnown RBP19.89■□□□□ 0.77
CAPN1-203ENST00000525013 CYP2F1P24903 491 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 CDC25CP30307 473 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 TRPC3Q13507 836 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 SDHAF4Q5VUM1 108 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 DPH6Q7L8W6 267 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 SPATA2LQ8IUW3 424 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-203ENST00000525013 ARID3BQ8IVW6 561 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-203ENST00000525013 MFSD6LQ8IWD5 586 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 YAF2Q8IY57 180 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 NUP210Q8TEM1 1887 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-203ENST00000525013 DNASE1L2Q92874 299 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 CCDC47Q96A33 483 aaKnown RBP19.89■□□□□ 0.77
CAPN1-203ENST00000525013 DDX23Q9BUQ8 820 aaKnown RBP19.89■□□□□ 0.77
CAPN1-203ENST00000525013 GDPD2Q9HCC8 539 aa19.89■□□□□ 0.77
CAPN1-203ENST00000525013 FAM237AA0A1B0GTK4 181 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 A0A1W2PQ27 194 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 A0A1W2PQ64 194 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 A0A1W2PQD8 194 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 MYBPHLA2RUH7 354 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 DPYSL4O14531 572 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 GABRDO14764 452 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 PHACTR2O75167 634 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 CLSTN1O94985 981 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 CST3P01034 146 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-203ENST00000525013 PRR29P0C7W0 189 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 GPR15P49685 360 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 RPL10AP62906 217 aaKnown RBP19.88■□□□□ 0.77
CAPN1-203ENST00000525013 CYP4F8P98187 520 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 CCDC142Q17RM4 750 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 ZNF852Q6ZMS4 543 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 ZNF516Q92618 1163 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 RSPRY1Q96DX4 576 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 IL21Q9HBE4 155 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 ABCB6Q9NP58 842 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 LTB4R2Q9NPC1 389 aa19.88■□□□□ 0.77
CAPN1-203ENST00000525013 MAGED2Q9UNF1 606 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-203ENST00000525013 MTF2Q9Y483 593 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-203ENST00000525013 ATP2C2O75185 946 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 PDGFRBP09619 1106 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 GLULP15104 373 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 LMO2P25791 158 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 CASP4P49662 377 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 PSMC1P62191 440 aaKnown RBP19.87■□□□□ 0.77
CAPN1-203ENST00000525013 DDR2Q16832 855 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 WDR72Q3MJ13 1102 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 SCN4BQ8IWT1 228 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 STKLD1Q8NE28 680 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 KBTBD7Q8WVZ9 684 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 NELL2Q99435 816 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 PKMYT1Q99640 499 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 SYT15Q9BQS2 421 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 MKNK1Q9BUB5 465 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 BCO2Q9BYV7 579 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 SNX25Q9H3E2 840 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 GOLPH3LQ9H4A5 285 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 TASP1Q9H6P5 420 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 DLGAP2Q9P1A6 1054 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 MRPS17Q9Y2R5 130 aaKnown RBP19.87■□□□□ 0.77
CAPN1-203ENST00000525013 VPS13AQ96RL7 3174 aa19.87■□□□□ 0.77
CAPN1-203ENST00000525013 WDR87Q6ZQQ6 2873 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 NCANO14594 1321 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 CSH1P0DML2 217 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 CSH2P0DML3 217 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 WARSP23381 471 aaKnown RBP19.86■□□□□ 0.77
CAPN1-203ENST00000525013 TNNC1P63316 161 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 BIRC3Q13489 604 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 KRBA2Q6ZNG9 492 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 LIMS2Q7Z4I7 341 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 FRMD5Q7Z6J6 570 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 OSBPL6Q9BZF3 934 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 GZF1Q9H116 711 aaPredicted RBP19.86■□□□□ 0.77
CAPN1-203ENST00000525013 KCTD10Q9H3F6 313 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 NXF1Q9UBU9 619 aaKnown RBP19.86■□□□□ 0.77
CAPN1-203ENST00000525013 CDH9Q9ULB4 789 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 FAM186AA6NE01 2351 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 OBSL1O75147 1896 aa19.86■□□□□ 0.77
CAPN1-203ENST00000525013 PDXKO00764 312 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 GFRA3O60609 400 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 ZNF202O95125 648 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 NR3C1P04150 777 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 HMGA1P17096 107 aaKnown RBP19.85■□□□□ 0.77
CAPN1-203ENST00000525013 GNL1P36915 607 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-203ENST00000525013 NBL1P41271 181 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 NLRP12P59046 1061 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 MYL6P60660 151 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 DPYDQ12882 1025 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 FAM171BQ6P995 826 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms