RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MIR1-1HGQ9H1L0 117 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 CHMP4BQ9H444 224 aaKnown RBP7.52□□□□□ -1.21
SDCBP-210ENST00000522843 RNF41Q9H4P4 317 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-210ENST00000522843 ZNF552Q9H707 407 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-210ENST00000522843 NRDE2Q9H7Z3 1164 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 MAN1C1Q9NR34 630 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 DNAJB4Q9UDY4 337 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 LOC400499M0QZD8 3231 aa7.52□□□□□ -1.21
SDCBP-210ENST00000522843 ADAMTS20P59510 1910 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 AKAP13Q12802 2813 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 A0A0U1RQF3 1178 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 TEX51A0A1B0GUA7 166 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 FITM1A5D6W6 292 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 MEIS3P2A8K0S8 358 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 INPPL1O15357 1258 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 ZC3H11AO75152 810 aaKnown RBP eCLIP7.51□□□□□ -1.21
SDCBP-210ENST00000522843 C22orf31O95567 290 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 SSBP05455 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
SDCBP-210ENST00000522843 MX1P20591 662 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 FGFR4P22455 802 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 KLRC2P26717 231 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 SLC11A1P49279 550 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 ALDH7A1P49419 539 aaKnown RBP7.51□□□□□ -1.21
SDCBP-210ENST00000522843 STAT5BP51692 787 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 EGR3Q06889 387 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 ITGB3BPQ13352 177 aaPredicted RBP7.51□□□□□ -1.21
SDCBP-210ENST00000522843 MTMR1Q13613 665 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 GIT2Q14161 759 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 NONOQ15233 471 aaKnown RBP eCLIP7.51□□□□□ -1.21
SDCBP-210ENST00000522843 NR0B2Q15466 257 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 CCDC178Q5BJE1 867 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 PARM1Q6UWI2 310 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 CYB5R4Q7L1T6 521 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 MRPL41Q8IXM3 137 aaKnown RBP7.51□□□□□ -1.21
SDCBP-210ENST00000522843 PHC3Q8NDX5 983 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 PIBF1Q8WXW3 757 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 SECISBP2LQ93073 1101 aaKnown RBP7.51□□□□□ -1.21
SDCBP-210ENST00000522843 CLDN23Q96B33 292 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 LTB4R2Q9NPC1 389 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 JADE2Q9NQC1 790 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 SEMA4GQ9NTN9 838 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 GPATCH2Q9NW75 528 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 SLC9A2Q9UBY0 812 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 DUSP13Q9UII6 198 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 GMEB2Q9UKD1 530 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 DSPP15924 2871 aaKnown RBP7.51□□□□□ -1.21
SDCBP-210ENST00000522843 NBEAQ8NFP9 2946 aa7.51□□□□□ -1.21
SDCBP-210ENST00000522843 ASH1LQ9NR48 2969 aaKnown RBP7.5□□□□□ -1.21
SDCBP-210ENST00000522843 DMXL2Q8TDJ6 3036 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 F5P12259 2224 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 CCNE2O96020 404 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
SDCBP-210ENST00000522843 ST13P50502 369 aaKnown RBP7.5□□□□□ -1.21
SDCBP-210ENST00000522843 IRX6P78412 446 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-210ENST00000522843 UBXN2BQ14CS0 331 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 MLF2Q15773 248 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-210ENST00000522843 SLC44A4Q53GD3 710 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 ODR4Q5SWX8 454 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 IFIT1BQ5T764 474 aaKnown RBP7.5□□□□□ -1.21
SDCBP-210ENST00000522843 SLC6A19Q695T7 634 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 TAS1R1Q7RTX1 841 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 ZNF280BQ86YH2 543 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 LINC01465Q8N7H1 131 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 SMARCC2Q8TAQ2 1214 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 LPPQ93052 612 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 EVI5LQ96CN4 794 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 INTS4Q96HW7 963 aaKnown RBP7.5□□□□□ -1.21
SDCBP-210ENST00000522843 CDHR1Q96JP9 859 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 ZNF668Q96K58 619 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-210ENST00000522843 DPH2Q9BQC3 489 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-210ENST00000522843 OSBPL6Q9BZF3 934 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 GPR62Q9BZJ7 368 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 AZI2Q9H6S1 392 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 RXFP3Q9NSD7 469 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 TBC1D13Q9NVG8 400 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 TJP2Q9UDY2 1190 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 KCTD3Q9Y597 815 aa7.5□□□□□ -1.21
SDCBP-210ENST00000522843 ZNF213O14771 459 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 TEX28O15482 410 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 HBP1O60381 514 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 EFEMP2O95967 443 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 PGRP06401 933 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 RETP07949 1114 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 SPATA31D3P0C874 917 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 RBM25P49756 843 aaKnown RBP7.49□□□□□ -1.21
SDCBP-210ENST00000522843 NT5C2P49902 561 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 CLCN3P51790 818 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 RPL6Q02878 288 aaKnown RBP7.49□□□□□ -1.21
SDCBP-210ENST00000522843 TROAPQ12815 778 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 MTAPQ13126 283 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 BMS1Q14692 1282 aaKnown RBP7.49□□□□□ -1.21
SDCBP-210ENST00000522843 CSRP2Q16527 193 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 UBE2SQ16763 222 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 TSNAXIP1Q2TAA8 658 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 LONRF3Q496Y0 759 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 LAIR1Q6GTX8 287 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 ABHD15Q6UXT9 468 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 SPATA31D4Q6ZUB0 917 aa7.49□□□□□ -1.21
SDCBP-210ENST00000522843 GET4Q7L5D6 327 aaPredicted RBP7.49□□□□□ -1.21
SDCBP-210ENST00000522843 SPPL2CQ8IUH8 684 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms