RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 SMARCB1Q12824 385 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 TCEAL1Q15170 157 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 PTPN14Q15678 1187 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 USP41Q3LFD5 358 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 FAM171A1Q5VUB5 890 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 FAM117BQ6P1L5 589 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 FUT10Q6P4F1 479 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 KCNT2Q6UVM3 1135 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 OSTM1Q86WC4 334 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 PHF13Q86YI8 300 aaPredicted RBP11.25□□□□□ -0.61
CD74-208ENST00000522246 RHOT2Q8IXI1 618 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 GPR65Q8IYL9 337 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 DCP1BQ8IZD4 617 aaKnown RBP11.25□□□□□ -0.61
CD74-208ENST00000522246 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 FIBCD1Q8N539 461 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 ANKRD52Q8NB46 1076 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 B3GALNT2Q8NCR0 500 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 MYCBPAPQ8TBZ2 947 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 STK32AQ8WU08 396 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 TFAP2BQ92481 460 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 RABGGTAQ92696 567 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 IGSF21Q96ID5 467 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 HNRNPABQ99729 332 aaKnown RBP11.25□□□□□ -0.61
CD74-208ENST00000522246 SYT15Q9BQS2 421 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 CYLDQ9NQC7 956 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.25□□□□□ -0.61
CD74-208ENST00000522246 RWDD3Q9Y3V2 267 aa11.25□□□□□ -0.61
CD74-208ENST00000522246 TMCO5BA8MYB1 307 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 B4GALT3O60512 393 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 ATP2A2P16615 1042 aaKnown RBP11.24□□□□□ -0.61
CD74-208ENST00000522246 NOMO3P69849 1222 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 PLCB3Q01970 1234 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 KRT17Q04695 432 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 MRPL58Q14197 206 aaKnown RBP11.24□□□□□ -0.61
CD74-208ENST00000522246 NFE2Q16621 373 aaPredicted RBP11.24□□□□□ -0.61
CD74-208ENST00000522246 FAM171BQ6P995 826 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 C4orf50Q6ZRC1 276 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 ANKS3Q6ZW76 656 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 ERICH1Q86X53 443 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 HERC6Q8IVU3 1022 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 OLIG1Q8TAK6 271 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 TMEM169Q96HH4 297 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 TTPALQ9BTX7 342 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 UBXN6Q9BZV1 441 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 LZTFL1Q9NQ48 299 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 AVENQ9NQS1 362 aaPredicted RBP11.24□□□□□ -0.61
CD74-208ENST00000522246 SPG21Q9NZD8 308 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 ADAM22Q9P0K1 906 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 WDR35Q9P2L0 1181 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 CACNG4Q9UBN1 327 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 HMGXB4Q9UGU5 601 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 LCMT1Q9UIC8 334 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 GTF3C4Q9UKN8 822 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 TSPAN16Q9UKR8 245 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 STRIP2Q9ULQ0 834 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 GUCA1BQ9UMX6 200 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 SSX2IPQ9Y2D8 614 aa11.24□□□□□ -0.61
CD74-208ENST00000522246 TIMM13Q9Y5L4 95 aaPredicted RBP11.24□□□□□ -0.61
CD74-208ENST00000522246 I3L4J1 428 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 MICAL2O94851 1124 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 ITGB1P05556 798 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 MMP8P22894 467 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 IGFBP6P24592 240 aaPredicted RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 ARHGAP25P42331 645 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 GPD2P43304 727 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 ACADSBP45954 432 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 BCAT1P54687 386 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 EPHB4P54760 987 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 BST2Q10589 180 aaKnown RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 INTS6LQ5JSJ4 861 aaKnown RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 VARS2Q5ST30 1063 aaKnown RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 PPP1R26Q5T8A7 1209 aaPredicted RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 RASIP1Q5U651 963 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 NAA35Q5VZE5 725 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 ZNF280DQ6N043 979 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 DDX53Q86TM3 631 aaKnown RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 MCOLN2Q8IZK6 566 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 SLC39A11Q8N1S5 342 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 C12orf29Q8N999 325 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 COLGALT1Q8NBJ5 622 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 HASPINQ8TF76 798 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 CPA5Q8WXQ8 436 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 SECISBP2LQ93073 1101 aaKnown RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 HSFY1Q96LI6 401 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 ZSWIM1Q9BR11 485 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 DUSP16Q9BY84 665 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 LACRTQ9GZZ8 138 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 MRPL47Q9HD33 250 aaKnown RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 MARCH5Q9NX47 278 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 UVRAGQ9P2Y5 699 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 MRPL42Q9Y6G3 142 aaKnown RBP11.23□□□□□ -0.61
CD74-208ENST00000522246 SCINQ9Y6U3 715 aa11.23□□□□□ -0.61
CD74-208ENST00000522246 USP27XA6NNY8 438 aa11.22□□□□□ -0.61
CD74-208ENST00000522246 NT5C1B-RDH14C9J2C7 533 aa11.22□□□□□ -0.61
CD74-208ENST00000522246 M0QYV0 167 aa11.22□□□□□ -0.61
CD74-208ENST00000522246 TLL1O43897 1013 aa11.22□□□□□ -0.61
CD74-208ENST00000522246 EFEMP2O95967 443 aa11.22□□□□□ -0.61
CD74-208ENST00000522246 CALCAP01258 141 aa11.22□□□□□ -0.61
CD74-208ENST00000522246 SOD2P04179 222 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms